Jatropha Genome Database
- JcCA0186681.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0186681.10 - phase: 1 /pseudo/partial
(1355 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29910.m000951 (+)-delta-cadinene synthase isozyme A, putative 628 e-179
>29910.m000951 (+)-delta-cadinene synthase isozyme A, putative
Length = 1644
Score = 628 bits (317), Expect = e-179
Identities = 751/895 (83%), Gaps = 3/895 (0%)
Strand = Plus / Plus
Query: 415 tgttaagcttgtatgaagcttcatatctcagtatacaaggagaaaccatactagatgaag 474
||||||||||| |||||||||||||| | ||| | ||||| |||| |||||||||||||
Sbjct: 440 tgttaagcttgcatgaagcttcatatatgagtgtgcaaggggaaaaaatactagatgaag 499
Query: 475 cttttgagttcactaaaactcaccttatcgcaacccaattgagttctcctccttctgatc 534
|| |||| ||||| |||||||||||||| || ||||||||||||||||||| | |||| |
Sbjct: 500 ctcttgaattcaccaaaactcaccttatggcgacccaattgagttctcctcttcctgacc 559
Query: 535 aagttagccatgccttaaggtggcctgcgcgtaggggcttacccaggaaagaggcttggc 594
|||| || |||||||| |||||||||| || || || ||||| ||||||||||| ||||
Sbjct: 560 aagtgagtcatgccttgaggtggcctgttcgcagaggtttaccgaggaaagaggcatggc 619
Query: 595 attacttctctatctacaagcaacgcgaggaacacagcgaaactctgttgaagctggcta 654
| |||||||| || ||| ||||| |||||| | ||| |||| |||||||||| |
Sbjct: 620 aatacttctccatttaccagcaagatagggaacatattgaacctctactgaagctggcaa 679
Query: 655 aactggattacaatatagtacaaaaattgcatcagaaggatatgagcaggatcacaaagt 714
| |||||| ||||||||| |||||||||||||| || || ||||||| ||||||| ||
Sbjct: 680 agttggatttcaatatagtgcaaaaattgcatcacaaagacatgagcattatcacaaggt 739
Query: 715 ggtggatagacttggatttcacaacaaagctaccttttgctcgagacagagtgatcgaat 774
|||||||||||||||| ||||||||||||||| |||| ||||| ||||| ||||||||||
Sbjct: 740 ggtggatagacttggacttcacaacaaagctatctttcgctcgggacagggtgatcgaat 799
Query: 775 gttcgttttgggcattaggaacattttctgagccacacttcgtttttgctagaaaagtat 834
| || || ||||||||||| |||| |||||| || || |||||||| ||| ||||||
Sbjct: 800 gctctttctgggcattaggggtgttttatgagcctcaatttgtttttgccagacaagtat 859
Query: 835 tgtctaaagctatggctatggtgtgtgtaatggatgatatctatgatgtgcatggcacaa 894
||||||||||| ||||||| ||| ||| |||||||| ||||||||||| ||||| ||||
Sbjct: 860 tgtctaaagctgtggctatcctgtctgttatggatgacatctatgatgttcatggtacaa 919
Query: 895 ttgaggaacttgagcttttaaccaaagtgattgaaagctgggatattagcatgaaagacc 954
|||| ||||||||||| || || |||| |||| || |||||||||||||||||||| |
Sbjct: 920 ttgaagaacttgagctcttcactgaagttgttgagaggtgggatattagcatgaaagatc 979
Query: 955 aacttccagattacatgaaggtgtattttgaagcattattagatttttattctgaaatag 1014
| ||||||||||| |||||| |||||||||||||||| ||||||| || |||||||||
Sbjct: 980 agcttccagattatatgaagtggtattttgaagcattaatagatttctacgctgaaatag 1039
Query: 1015 agaaagaaacaaccaaggaaggaaggtctttctgtattcattatgcgaaagaagcggtga 1074
|| ||||||||||||| ||| ||||| |||||||||||||| || || ||||||||||
Sbjct: 1040 aggctgaaacaaccaagggagggaggtccttctgtattcattacgcaaaggaagcggtga 1099
Query: 1075 agaagcaagttggagcctacataactgaagcaagatggttcaacaatcattatatgccaa 1134
|||||||||| |||||||||| ||||||||||||||||| |||||| ||||| ||||||
Sbjct: 1100 agaagcaagtgagagcctacatcactgaagcaagatggtttaacaatgattatgtgccaa 1159
Query: 1135 catttgaagaatatatttctaatgctgtgattagttctgcttatcccatgttgataacct 1194
|| | |||||||||||||||||||||||||| || ||| |||||||||| |||||||| |
Sbjct: 1160 cactggaagaatatatttctaatgctgtgatcagctctacttatcccatcttgataactt 1219
Query: 1195 tatcattttgtgcgatgggtgaagttgcttcaaagcaagtatttgattggctattcactg 1254
| || || || | ||||| || | ||||| ||| | || ||||||||||| ||||| |
Sbjct: 1220 tgtccttctgcggaatgggcaaattcgcttccaaggatgtctttgattggctgttcaccg 1279
Query: 1255 aatc---taaacttctatatactgcatcaggtctcgcaaggctcattaatgacat 1306
|| | |||||| ||||||||||||||||||| || |||||||| |||||||
Sbjct: 1280 aacctaataaactattatatactgcatcaggtcttgctaggctcatagatgacat 1334
Score = 56.0 bits (28), Expect = 6e-07
Identities = 43/48 (89%)
Strand = Plus / Plus
Query: 1 tcgaacagcagagtttcacccatcagtgtggggtgactacttcatcaa 48
|||||||||| | ||||| ||||| || ||||||||||||||||||||
Sbjct: 45 tcgaacagcacaatttcatccatccgtctggggtgactacttcatcaa 92