Jatropha Genome Database

JcCA0165421.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0165421.10 + phase: 0 
         (219 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30068.m002596 Ubiquitin carboxyl-terminal hydrolase, putative          82   2e-15

>30068.m002596 Ubiquitin carboxyl-terminal hydrolase, putative
          Length = 2817

 Score = 81.8 bits (41), Expect = 2e-15
 Identities = 71/81 (87%)
 Strand = Plus / Plus

                                                                       
Query: 74  aacagattgtcaaggagttgatcgatgaagccgagcttgatttgaaggaaggcaacttgt 133
           ||||||| ||||||||||||||  ||||||| |||||||| ||||| |||||||| || |
Sbjct: 77  aacagatcgtcaaggagttgatgaatgaagctgagcttgacttgaaagaaggcaatttat 136

                                
Query: 134 actacgttgtttccgccaggt 154
           ||||||| ||||| |||||||
Sbjct: 137 actacgtcgtttctgccaggt 157