Jatropha Genome Database

JcCA0155261.30
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0155261.30 + phase: 0 /pseudo/partial
         (762 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29877.m000465 exonuclease, putative                                   256   2e-67

>29877.m000465 exonuclease, putative
          Length = 585

 Score =  256 bits (129), Expect = 2e-67
 Identities = 394/481 (81%), Gaps = 1/481 (0%)
 Strand = Plus / Plus

                                                                       
Query: 29  cagaaattgtattttttgacttagaaacaacagtacccaatagaattggacaaaaattct 88
           |||| |||||||| || ||||| ||||||||||| ||||| |||   |||  |  |||||
Sbjct: 38  cagagattgtattcttcgacttggaaacaacagtgcccaacagagcaggaggacgattct 97

                                                                       
Query: 89  gggtattggaatttggtgcaattatagtatgtccaagaaaacttgttgaattagaaagtt 148
           |||||||||| ||||||||||||||||| ||||||||||||||||||||  |||| ||||
Sbjct: 98  gggtattggagtttggtgcaattatagtttgtccaagaaaacttgttgagatagagagtt 157

                                                                       
Query: 149 ttagtaccctaattaggcctaaagatttatctgttgttgcattgaagtctagtagaagcg 208
            || ||| || || || |||||||| || |||||||| ||||| |  ||| || |||| |
Sbjct: 158 atactactctcataagacctaaagacttgtctgttgtggcattaagatctggtcgaagtg 217

                                                                       
Query: 209 atgggataactagagaagctgtggctaatgcacctat-tttgaagaagttgcagataaga 267
            ||| |||||| |  | ||||| ||  ||||||||   |||||||||||| | || || |
Sbjct: 218 gtggcataactcgcaacgctgttgcagatgcacctgcatttgaagaagtttctgacaaaa 277

                                                                       
Query: 268 tattcagtattttgaatgggagaatatgggcagggcacaatattcaaagatttgattgta 327
           | |  || || |||||||| |||||||||||||| |||||||| | ||||||||||||||
Sbjct: 278 tttatagcatcttgaatggaagaatatgggcaggacacaatatccgaagatttgattgta 337

                                                                       
Query: 328 tacgaattaaggaagcatttgcagatattggtatggctgcacctgttcctgttggtatga 387
           | || ||||||||||||||||||||  |||||| || | ||||||| |||||||| ||||
Sbjct: 338 ttcgcattaaggaagcatttgcagagcttggtaaggatccacctgtacctgttggaatga 397

                                                                       
Query: 388 ttgattctttaggggttctgggtgacaagtttggtagaagagctggtaatttaaagatgg 447
           |||| |||||||||||  ||  | | |||||||| ||||||||||||||| | |||||||
Sbjct: 398 ttgactctttaggggtcttgtctcagaagtttggcagaagagctggtaatctcaagatgg 457

                                                                       
Query: 448 caactttggctacatactttggactcgggcagcaaaagcataggagtcttgatgatgttc 507
           ||||||| |||   |||||||| || || |||||||||||  |||| |||||||||||||
Sbjct: 458 caactttagctgattactttggccttggacagcaaaagcaccggagccttgatgatgttc 517

            
Query: 508 g 508
           |
Sbjct: 518 g 518