Jatropha Genome Database
- JcCA0155031.20
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0155031.20 + phase: 0
(738 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30170.m013941 zinc finger protein, putative 98 9e-20
27395.m000081 zinc finger protein, putative 78 8e-14
29676.m001667 zinc finger protein, putative 78 8e-14
29676.m001648 zinc finger protein, putative 56 3e-07
30138.m003918 conserved hypothetical protein 52 5e-06
>30170.m013941 zinc finger protein, putative
Length = 1107
Score = 97.6 bits (49), Expect = 9e-20
Identities = 151/185 (81%)
Strand = Plus / Plus
Query: 59 tggctgagccacttccttgccctaggtgcagctccaccaacaccaagttctgctactaca 118
||||||||||||| || ||||| ||||| || | |||||| || || ||||||||||
Sbjct: 434 tggctgagccactcccgtgcccaaggtgtgattctaacaacacaaaattttgctactaca 493
Query: 119 acaactataatctttctcagcctcgtcatttctgcaagggttgtcgccgctactggaccc 178
| ||||| || ||||||||||| || ||||||||||||| ||| | || ||||||||||
Sbjct: 494 ataactacaacctttctcagccacgccatttctgcaaggcatgtagacgttactggaccc 553
Query: 179 acggcggaacacttcgtaacgtccctgttggtggtggtacccgcaaaaactccaagcgct 238
| || || || ||||||||||| ||| |||| ||||| |||||||| ||||| || || |
Sbjct: 554 atggtggcactcttcgtaacgtacctattggcggtggaacccgcaagaactcgaaacgtt 613
Query: 239 ctcgc 243
|||||
Sbjct: 614 ctcgc 618
Score = 81.8 bits (41), Expect = 5e-15
Identities = 83/97 (85%)
Strand = Plus / Plus
Query: 434 aaaatggaaactttatttcgctgcttaactcgcagcagggaccagggttcatggggatgg 493
|||| ||||||||||| |||||| | | ||| |||||||||| |||||||||||||||||
Sbjct: 809 aaaacggaaactttatctcgctgttgagctctcagcagggacaagggttcatggggatgg 868
Query: 494 tagggtacggagcgggttttggatacgggttatgtga 530
| || ||||| | ||||||||||| ||||| |||||
Sbjct: 869 ttggttacgggccaggttttggatatgggttttgtga 905
>27395.m000081 zinc finger protein, putative
Length = 753
Score = 77.8 bits (39), Expect = 8e-14
Identities = 60/67 (89%)
Strand = Plus / Plus
Query: 90 ctccaccaacaccaagttctgctactacaacaactataatctttctcagcctcgtcattt 149
||||| ||||||||| |||||||||||||||||||||||| | ||||| ||||| |||||
Sbjct: 81 ctccaacaacaccaaattctgctactacaacaactataatttgtctcaacctcgccattt 140
Query: 150 ctgcaag 156
||||||
Sbjct: 141 ttgcaag 147
>29676.m001667 zinc finger protein, putative
Length = 738
Score = 77.8 bits (39), Expect = 8e-14
Identities = 108/131 (82%)
Strand = Plus / Plus
Query: 94 accaacaccaagttctgctactacaacaactataatctttctcagcctcgtcatttctgc 153
||||| |||||||||||||| ||||| |||||||| | |||||||| |||||||| |||
Sbjct: 115 accaataccaagttctgctattacaataactataacttctctcagccacgtcatttttgc 174
Query: 154 aagggttgtcgccgctactggacccacggcggaacacttcgtaacgtccctgttggtggt 213
||| ||| ||||| ||||||||||| || || || || ||| || ||||| |||| ||
Sbjct: 175 aagtcttgccgccgttactggacccatggtggcactctccgtgacatccctattggcggc 234
Query: 214 ggtacccgcaa 224
|| ||||||||
Sbjct: 235 ggcacccgcaa 245
>29676.m001648 zinc finger protein, putative
Length = 1008
Score = 56.0 bits (28), Expect = 3e-07
Identities = 52/60 (86%)
Strand = Plus / Plus
Query: 97 aacaccaagttctgctactacaacaactataatctttctcagcctcgtcatttctgcaag 156
||||| ||||| |||||||| |||||||||||||| |||||||||| || || ||||||
Sbjct: 232 aacactaagttttgctactataacaactataatctcactcagcctcgccacttttgcaag 291
>30138.m003918 conserved hypothetical protein
Length = 942
Score = 52.0 bits (26), Expect = 5e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 96 caacaccaagttctgctactacaacaacta 125
|||||||||||| |||||||||||||||||
Sbjct: 129 caacaccaagttttgctactacaacaacta 158