Jatropha Genome Database
- JcCA0155001.30
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0155001.30 - phase: 0
(1830 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29904.m002987 9-cis-epoxycarotenoid dioxygenase, putative 549 e-155
>29904.m002987 9-cis-epoxycarotenoid dioxygenase, putative
Length = 1857
Score = 549 bits (277), Expect = e-155
Identities = 951/1178 (80%)
Strand = Plus / Plus
Query: 385 gttcaaatatcgggtaatttcgcgccggttcaggagtttcccgttcgtcacggtctggag 444
|||||||| || ||||||||||||||||||| |||| ||| |||| ||| ||||| ||
Sbjct: 355 gttcaaatttcaggtaatttcgcgccggttcttgagtgtccggttcatcatggtctagaa 414
Query: 445 gttgtgggccagattccggaatgcctacgtggcgtttatttacgcaacggcgctaatcct 504
||||||||||| |||||| | || ||||||||||||| ||||| ||||| || ||||||
Sbjct: 415 gttgtgggccatattccgaacagcttacgtggcgtttacttacgaaacggtgcaaatcct 474
Query: 505 gtgtatgaacccaaaggtggacaccacttgtttgatggcgatggtatgattcatgctgta 564
||||||| ||||| ||| || |||||||| ||||| || ||||||||| ||||||| ||
Sbjct: 475 gtgtatgcacccacaggcggccaccacttatttgacggtgatggtatggttcatgcagtt 534
Query: 565 accttgggatctgggaaccaagccagttatagctgcaggtatacacgtacgagccggctg 624
|| ||||||| || |||| |||||||||||||||||||| || ||||||||||||||
Sbjct: 535 actttgggatatgaaaaccgagccagttatagctgcaggttcactcgtacgagccggctc 594
Query: 625 gagcaagaagctgcattgggtaggccgctttttcccaagccgataggtgagttgcatgga 684
||||||||||| |||||||| ||| | |||| || || || || |||||| ||||||||
Sbjct: 595 gagcaagaagccgcattgggcaggtcagttttccctaaaccaattggtgagctgcatgga 654
Query: 685 cccttgggcttggctcggctcatgttgttcatggctcgagctggtgttggcttggttgac 744
| ||| || || |||||||| | | ||||||| |||||| ||| | || |||| ||
Sbjct: 655 cacttaggttttgctcggcttttaatattcatggttcgagccggtatcggtctggtagat 714
Query: 745 ggatcacgtggcagtggcgtggcaaatgctgggttaatttattttaacggacgattattg 804
|| |||||||||| ||||| ||||| ||||||||| ||||||| ||||| ||||||||
Sbjct: 715 gggtcacgtggcacaggcgtagcaaacgctgggttagtttatttcaacggtcgattatta 774
Query: 805 gccatgtcggaagaagatcttccttatcaggtaaagatcattgatgatggtgatcttgaa 864
|||||||| || || |||||||||||||| |||||||||| | ||||||||||||||||
Sbjct: 775 gccatgtcagaggatgatcttccttatcatgtaaagatcaagggtgatggtgatcttgaa 834
Query: 865 acggttggacggttcagttttcacaatcaactcgatggtcccatgattgcacaccctaaa 924
||| | |||||||||||| | ||||||| ||| |||| |||||||||||||||||
Sbjct: 835 acgatcaaacggttcagtttcgatgatcaacttgattgtccaatgattgcacaccctaag 894
Query: 925 gtggaccctatcaccggcgatttgcatgcactgagttgcaacgtaatnnnnnnnccgtac 984
||||||||| | |||||||| | |||||| | |||| ||||||| | || |||
Sbjct: 895 gtggaccctgtaaccggcgagctccatgcattaagttacaacgtagtacaaaagccttac 954
Query: 985 ttgaaatacatcaagttcgacaagcacggtaaaaagtcacgtgacctcagcattaccttg 1044
||||||||| ||||||| |||||| |||| ||||||||||||||| | || |||||
Sbjct: 955 ttgaaatacttcaagtttgacaagtacggcaaaaagtcacgtgacttggatataacctta 1014
Query: 1045 gaccagccaaccatgatccacgacttcgcagtttcacgtaattttgtaataatcccggat 1104
||||||| || |||||||| ||||| || || | | ||||| ||| |||| ||||||
Sbjct: 1015 caccagcccacaatgatccatgactttgcggtcaccaggaatttcgtagtaataccggat 1074
Query: 1105 catcaagttgtattcaagttaaccgagatgattcggggtgggtcacccgtaatatacgac 1164
|| ||||| || ||||||||| ||||||||||||| || |||||||||||||| ||||||
Sbjct: 1075 caccaagtagttttcaagttatccgagatgattcgtggcgggtcacccgtaatttacgac 1134
Query: 1165 aaagaaaagacttcaagatttgggattttgtccaaaaatgacatgagcgaatcaagaatc 1224
||| | ||||||||||| ||||| ||||| || |||||||| ||| || || | ||
Sbjct: 1135 aaaaacaagacttcaaggtttggaattttatcaaaaaatgaagtgaatgagtctgggatt 1194
Query: 1225 caatgggttgatgtgccaaattgcttttgcttccatttatataacgcatgggaagaaatt 1284
|||||| |||| || |||||||| |||||||| ||||| | || ||||||| ||||||
Sbjct: 1195 caatggattgaggtaccaaattgtttttgctttcatttgtggaattcatgggaggaaatt 1254
Query: 1285 tccgacaacggtgatgacattatcgttgttatcgggtcatgcatgaacccgccagattcc 1344
|| ||||||||| | ||||| |||||||||||||||||||||||||| || |||||
Sbjct: 1255 tctactaacggtgataaaattattgttgttatcgggtcatgcatgaacccacccgattcg 1314
Query: 1345 atgttcagtgaatcggaaattccagttcaaattgaattaaccgaaatccggtttaacttg 1404
|| |||| |||||| |||| || |||||| |||| || | || || || || ||| ||
Sbjct: 1315 atcttcaatgaatccgaaacagcaattcaaagtgaactatcagagattcgcttaaacatg 1374
Query: 1405 agggccggagagtcgactatgaagactctagtatcaggtatgaatttggaagtgggtgta 1464
||| || ||||||| || ||| | |||| || |||||||| |||| |||| |
Sbjct: 1375 aggacccgagagtcaacccggaaagccatagtcaggggcatgaatttagaagcgggtcaa 1434
Query: 1465 gtaaaccggaaacttttgggtgagaaaacccagttcgtttacttggcaatagcagaacca 1524
|||||||| || || ||||| ||||||||| || || |||||||||||||| ||||||
Sbjct: 1435 gtaaaccgaaagtttgtgggtcagaaaacccggtatgtatacttggcaatagcggaacca 1494
Query: 1525 tggccgaagtgttgcggtattgctagggttgatttgga 1562
|||||||||||| | |||||||||| ||||||||||||
Sbjct: 1495 tggccgaagtgtagtggtattgctaaggttgatttgga 1532
Score = 135 bits (68), Expect = 1e-30
Identities = 140/164 (85%)
Strand = Plus / Plus
Query: 1648 gaaggtgaaggatatataatagggtatgtgagagatgagataaaagagaagtctgagttg 1707
|||||||||||||| || || || | ||| |||||||||||||| || | ||||||||||
Sbjct: 1675 gaaggtgaaggatacattatgggttttgtaagagatgagataaaggaaaggtctgagttg 1734
Query: 1708 gtaatagtaaatgcattggacatggagcaagtagcttcggtaaggttgcccagtagagtg 1767
|| ||||| |||||| | |||||||||||||||||| ||||| ||||||| | |||||
Sbjct: 1735 gtgatagtgaatgcaacaggcatggagcaagtagcttccgtaagtttgcccactcgagtg 1794
Query: 1768 ccttatgggtttcatggtactttcgtaactgaagatgagttaaa 1811
|||||||| |||||||||||||| || | ||||||||| |||||
Sbjct: 1795 ccttatggatttcatggtacttttgttagtgaagatgaattaaa 1838