Jatropha Genome Database

JcCA0155001.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0155001.10 + phase: 0 /partial/short
         (117 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29904.m002990 potassium channel beta, putative                        147   2e-35

>29904.m002990 potassium channel beta, putative
          Length = 987

 Score =  147 bits (74), Expect = 2e-35
 Identities = 104/114 (91%)
 Strand = Plus / Plus

                                                                       
Query: 4   cagattcatgagaacatgaaagctatcgacgtgatccccttgttaactcctgccgtgatg 63
           |||||||| ||||||||||||||||| || || |||||||| || |||||||| ||||||
Sbjct: 871 cagattcaagagaacatgaaagctattgatgtcatccccttattgactcctgctgtgatg 930

                                                                 
Query: 64  gagaagattgaggctgttgttcaaaccaagccaaaacgtccagattcttatagg 117
           |||||||||||||| |||||||||| ||||||||||||||||||||| ||||||
Sbjct: 931 gagaagattgaggccgttgttcaaagcaagccaaaacgtccagattcatatagg 984