Jatropha Genome Database
- JcCA0154851.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0154851.10 + phase: 1 /partial
(578 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29822.m003391 aberrant large forked product, putative 547 e-155
29822.m003388 aberrant large forked product, putative 214 4e-55
29827.m002648 aberrant large forked product, putative 145 3e-34
29822.m003390 conserved hypothetical protein 56 2e-07
>29822.m003391 aberrant large forked product, putative
Length = 1032
Score = 547 bits (276), Expect = e-155
Identities = 486/556 (87%)
Strand = Plus / Plus
Query: 20 accagaagaaacagcaattttacagcagaatgcaacttataatgttgataagatatcaac 79
||||||||||| |||||||||||| ||||||||||||||||| | || || |||||||
Sbjct: 471 accagaagaaagagcaattttacaacagaatgcaacttataacctggacaaactatcaac 530
Query: 80 ggcaaaatggaagccactccagacccttgcattatcaggacagataagctctatggataa 139
|| ||||||||||| |||||||| ||||||||||||||||||||| | | |||||||||
Sbjct: 531 agcgaaatggaagccgctccagacgcttgcattatcaggacagatacgatttatggataa 590
Query: 140 gctactagaaaatggacttgatattgacaatgttgataaggatggtctcactgctctgca 199
| | |||| | |||||||||||||||||| ||| ||||||||||||||||| ||||||||
Sbjct: 591 gttgctagcagatggacttgatattgacagtgtggataaggatggtctcacggctctgca 650
Query: 200 aaaagcaattattggtaaaaaggaagctgtaataagtcatcttttaaggaaaggtgcaag 259
|| |||||| ||||||||||||| ||||| || ||||||||| |||| ||||||||||
Sbjct: 651 taaggcaattgttggtaaaaaggaggctgttattagtcatcttctaagaaaaggtgcaaa 710
Query: 260 ccctcatgtcaaagatcaggatggtgctagcactctccattatgcagttcaagttggtgc 319
||||||||||||||||| ||||||||||||| |||||||||||||||||||| |||||||
Sbjct: 711 ccctcatgtcaaagatcgggatggtgctagctctctccattatgcagttcaaattggtgc 770
Query: 320 taagcaaactgtgaagttattgataaaatatgaggttgatgtcaacattgcagataatga 379
||| ||||||||| |||| || |||||| | |||||| |||| |||||||||||||
Sbjct: 771 cctgcagactgtgaagctattaattaaatataatgttgatatcaatgttgcagataatga 830
Query: 380 aggctggactcccttgcatattgcagtgcaaagtagaaatagagatatagttaaaatttt 439
||| |||||||| ||||| ||||||| |||| |||||| ||||||||||||||| || |
Sbjct: 831 aggttggactccattgcacgttgcagtacaaactagaaaaagagatatagttaaagttct 890
Query: 440 gttagtgaatggtgcagataagaacagacgaaataaggatggaagaacacctctggatct 499
||||||||||||||||||||||||||| |||||||||||||| ||||| |||||||
Sbjct: 891 attagtgaatggtgcagataagaacagaaaaaataaggatggaatgacacccgtggatct 950
Query: 500 ttgtttatgttatggaaaagacttcaaatcgtatgaccttgcaaagttagtaaagattgt 559
||| ||||||||||| |||||||||||||| ||||||||||| |||||||| ||| | ||
Sbjct: 951 ttgcttatgttatggcaaagacttcaaatcatatgaccttgccaagttagtgaaggtcgt 1010
Query: 560 accagctaacagagat 575
||| ||||||||||||
Sbjct: 1011 acctgctaacagagat 1026
>29822.m003388 aberrant large forked product, putative
Length = 510
Score = 214 bits (108), Expect = 4e-55
Identities = 227/266 (85%), Gaps = 3/266 (1%)
Strand = Plus / Plus
Query: 84 aaatggaagccactccagacccttgcattatcaggacagataagctctatggataagcta 143
|||||||||||||||||||| ||||||||||||||||||||| | | |||||||||| |
Sbjct: 226 aaatggaagccactccagacgcttgcattatcaggacagatacgatttatggataagttg 285
Query: 144 ctagaaaatggacttgatattgacaatgttgataaggatggtctcactgctctgcaaaaa 203
|||| | |||||||| |||| |||| || ||||||||||||||||| |||||||||
Sbjct: 286 ctagcagatggacttaatatcgacagtggggataaggatggtctcacagctctgcaattg 345
Query: 204 gcaattattggtaaaaaggaagctgtaataagtcatcttttaaggaaaggtgcaagccct 263
|||||| |||||||| |||| |||| || |||||||||||||| |||||||||| ||||
Sbjct: 346 gcaattgttggtaaagaggaggctgccattagtcatcttttaagaaaaggtgcaaaccct 405
Query: 264 catgtcaaagatcaggatggtgctagcactctccattatgcagttcaagttggtgctaag 323
|||||||||| |||||||||||| |||||||||||||||||||| ||||||| |
Sbjct: 406 catgtcaaag---gagatggtgctagctctctccattatgcagttcaaattggtgccctg 462
Query: 324 caaactgtgaagttattgataaaata 349
|| ||||||||| |||| || |||||
Sbjct: 463 cagactgtgaagctattaatcaaata 488
>29827.m002648 aberrant large forked product, putative
Length = 612
Score = 145 bits (73), Expect = 3e-34
Identities = 153/179 (85%), Gaps = 3/179 (1%)
Strand = Plus / Plus
Query: 378 gaaggctggactcccttgcatattgcagtgcaaagtagaaatagagatatagttaaaatt 437
||||| |||||||| ||||| |||||||||||| | |||| |||||| |||||||||
Sbjct: 307 gaaggttggactccattgcacgttgcagtgcaaactggaaaaagagat---gttaaaatt 363
Query: 438 ttgttagtgaatggtgcagataagaacagacgaaataaggatggaagaacacctctggat 497
|||||||||||||||||||| |||||||| | ||||||||||||| ||||| |||||
Sbjct: 364 ctgttagtgaatggtgcagatgagaacagaaggaataaggatggaatgacacccatggat 423
Query: 498 ctttgtttatgttatggaaaagacttcaaatcgtatgaccttgcaaagttagtaaagat 556
||||| ||||||||||| |||| |||||||| |||||||| || |||||||| |||||
Sbjct: 424 ctttgcttatgttatggcgaagagttcaaatcatatgacctcgccaagttagtgaagat 482
Score = 131 bits (66), Expect = 5e-30
Identities = 138/162 (85%)
Strand = Plus / Plus
Query: 8 acagcttttaggaccagaagaaacagcaattttacagcagaatgcaacttataatgttga 67
||||||| | ||| ||||||||| | |||||||||| ||||||||||||||||| | ||
Sbjct: 144 acagcttgtgggatcagaagaaagaccaattttacaacagaatgcaacttataacctgga 203
Query: 68 taagatatcaacggcaaaatggaagccactccagacccttgcattatcaggacagataag 127
|| ||||||| | |||||| ||||| |||||||| ||||||||||||||||||||| |
Sbjct: 204 caaactatcaacagaaaaatgcaagccgctccagacgcttgcattatcaggacagatacg 263
Query: 128 ctctatggataagctactagaaaatggacttgatattgacaa 169
| |||||||||| | |||| | |||||||||||||||||||
Sbjct: 264 atttatggataagttgctagcagatggacttgatattgacaa 305
>29822.m003390 conserved hypothetical protein
Length = 216
Score = 56.0 bits (28), Expect = 2e-07
Identities = 59/68 (86%), Gaps = 1/68 (1%)
Strand = Plus / Plus
Query: 474 aaggatggaagaacacctctggatctttgtttatgttatggaaaagacttcaaatcgtat 533
|||||||||| ||||| |||||||||| |||| |||||| ||||||||||| || |||
Sbjct: 62 aaggatggaatgacacccgtggatctttgcttat-ttatggcaaagacttcaagtcatat 120
Query: 534 gaccttgc 541
||||||||
Sbjct: 121 gaccttgc 128