Jatropha Genome Database

JcCA0154801.50
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0154801.50 - phase: 2 /partial
         (271 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30131.m007259 similarity to glucose regulated repressor protein,...   268   2e-71

>30131.m007259 similarity to glucose regulated repressor protein,
            putative
          Length = 1224

 Score =  268 bits (135), Expect = 2e-71
 Identities = 234/267 (87%)
 Strand = Plus / Plus

                                                                        
Query: 1    atgctgtgaggagattacagatgctgcttttcagggtttagcaactattaaaactgaatt 60
            ||||||||||||| |||| |||||||||||||| | ||||| |||| |  |||   ||||
Sbjct: 951  atgctgtgaggaggttaccgatgctgcttttcaagttttaggaactgtggaaaacaaatt 1010

                                                                        
Query: 61   ggggctgaagattttgaaggtcagtaactgtccaaagattactgtgactgggataggcat 120
            |  | | ||| |||||||| ||||||||||||||||||| || |||||||||||||| | 
Sbjct: 1011 gaagttaaaggttttgaagatcagtaactgtccaaagataacagtgactgggatagggag 1070

                                                                        
Query: 121  gctgttggagaaatgcaacggtttagaataccttgatgtgaggtcctgcccacatgtcac 180
            ||| || ||||| ||||| | ||||||||||||||| |||||||||||||| ||||| ||
Sbjct: 1071 gcttttagagaagtgcaatgttttagaataccttgacgtgaggtcctgcccgcatgttac 1130

                                                                        
Query: 181  aaagtcaggttgtgatgaggctggtctgcagtttcctaaatgttgtaaagtaaattacac 240
            |||||||||||| || ||||||||| ||||||||||| ||||||||||||||||||||||
Sbjct: 1131 aaagtcaggttgcgaggaggctggtttgcagtttcctgaatgttgtaaagtaaattacac 1190

                                       
Query: 241  aggaagcttaaatgagccagatgttct 267
            |||||||||||||||||||||||||||
Sbjct: 1191 aggaagcttaaatgagccagatgttct 1217