Jatropha Genome Database

JcCA0154651.40
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0154651.40 + phase: 0 /partial
         (493 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29912.m005492 cak1, putative                                          159   2e-38

>29912.m005492 cak1, putative
          Length = 1404

 Score =  159 bits (80), Expect = 2e-38
 Identities = 224/272 (82%)
 Strand = Plus / Plus

                                                                       
Query: 166 gaaatccacgactatcaatcggctttccgtgaaatcgaggccttacagatgctccagaac 225
           ||||||||||| || ||||| || || || ||||| ||| | ||||| || || || |||
Sbjct: 169 gaaatccacgattaccaatctgcgtttcgggaaattgagactttacaaatccttcaaaac 228

                                                                       
Query: 226 tgccctaatgttgtgattatgcacgagtacttttggagagaagatgaggacgccgttttg 285
           ||||| || || ||  || ||||||||||||||||||||||||| ||||| || ||||||
Sbjct: 229 tgccccaacgtggtcgttttgcacgagtacttttggagagaagacgaggatgctgttttg 288

                                                                       
Query: 286 gttttggagttcctgagaacggatttggctgctgtaattaaggaagggaaaaagaacggg 345
           |||||||||||  |||| || ||||| || || || |||||| |||| || ||||| || 
Sbjct: 289 gttttggagtttttgaggacagatttagcggcggttattaagcaaggaaagaagaatggt 348

                                                                       
Query: 346 attagtgttggagaggttaagagatggatggtgcagatattgtgtggtgttgatgcttgc 405
           ||||| |||||||| || |||||||||||||| ||||| |||||||| || || || || 
Sbjct: 349 attagcgttggagaagtcaagagatggatggttcagattttgtgtggagtggacgcgtgt 408

                                           
Query: 406 cataggaatatgattgtgcatcgggatttgaa 437
           |||||||||| |||||||||||| || |||||
Sbjct: 409 cataggaatacgattgtgcatcgagacttgaa 440