Jatropha Genome Database
- JcCA0154651.30
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0154651.30 - phase: 0
(783 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30170.m013630 tubulin alpha chain, putative 823 0.0
30099.m001691 tubulin alpha chain, putative 603 e-172
30084.m000186 tubulin alpha chain, putative 301 3e-81
29950.m001120 tubulin alpha chain, putative 280 1e-74
29822.m003495 tubulin alpha chain, putative 218 4e-56
>30170.m013630 tubulin alpha chain, putative
Length = 1356
Score = 823 bits (415), Expect = 0.0
Identities = 610/675 (90%)
Strand = Plus / Plus
Query: 102 caatcttaaccgccttgtatctcaggtcatctcatccctcactgcctctttgaggtttga 161
|||||| ||||| ||||| |||||||| ||||||||||||||||||||||||||||||||
Sbjct: 675 caatctcaaccgtcttgtttctcaggtgatctcatccctcactgcctctttgaggtttga 734
Query: 162 tggtgctcttaatgtggatgtcactgagttccagaccaacttggttccctatcccaggat 221
||| ||||||||||||||||| || ||||||||||||||| ||||||| |||||||||||
Sbjct: 735 tggagctcttaatgtggatgtgaccgagttccagaccaacctggttccttatcccaggat 794
Query: 222 ccatttcatgctttcctcttatgcccccgtgatatcagctgagaaggcatatcacgagca 281
|||||||||||||||||||||||||| || || || || || |||||||| || |||||
Sbjct: 795 tcatttcatgctttcctcttatgcccctgtcatctctgcagaaaaggcataccatgagca 854
Query: 282 actatctgttgctgagattacaaatagtgcctttgagccttcatccatgatggccaagtg 341
|| ||||| ||||| || || ||||| || ||||||||||| || |||||||| |||||
Sbjct: 855 gctttctgtcgctgaaatcaccaatagcgcttttgagccttcttctatgatggctaagtg 914
Query: 342 tgacccacgccatggcaagtacatggcttgctgcctgatgtaccgtggtgatgttgtgcc 401
||| || |||||||||||||||||||| |||||||| |||||||| ||||||||||| ||
Sbjct: 915 tgatcctcgccatggcaagtacatggcctgctgcctcatgtaccggggtgatgttgtccc 974
Query: 402 caaggatgtgaatgcagctgtggccaccatcaagactaagcggactatccagtttgttga 461
|||||||| ||||| || ||||||||||||||||||||||| |||||||| ||||||||
Sbjct: 975 taaggatgtcaatgctgcagtggccaccatcaagactaagcgaactatccaatttgttga 1034
Query: 462 ttggtgccctactggattcaagtgtggcatcaactaccagccaccaactgttgttccagg 521
||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||| ||
Sbjct: 1035 ttggtgccctactggattcaagtgtggaatcaactaccagccacccactgttgttcctgg 1094
Query: 522 aggtgaccttgccaaggtgcagagggctgtatgtatgatctccaattctacaagcgttgc 581
||||||||||||||||||||| |||||||| || |||||||||||||| || || |||||
Sbjct: 1095 aggtgaccttgccaaggtgcaaagggctgtttgcatgatctccaattccaccagtgttgc 1154
Query: 582 agaagtcttctcccgtattgaccacaagttcgatctcatgtatgctaagcgtgcctttgt 641
||||||||||| |||||||| |||||||| ||||| |||||||| |||||||| |||||
Sbjct: 1155 ggaagtcttctctcgtattgatcacaagtttgatcttatgtatgccaagcgtgcttttgt 1214
Query: 642 ccattggtatgttggtgagggcatggaagaaggagagttctcagaggcccgtgaggatct 701
||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 1215 gcattggtatgtgggtgagggcatggaagaaggagagttctctgaggcccgtgaggatct 1274
Query: 702 tgctgctctggagaaggattatgaggaggttggtgctgaatctgccgaaggagaggatgg 761
|||||| ||||||||||||||||||||||||| ||||||||||| ||||| ||||||||
Sbjct: 1275 tgctgccttggagaaggattatgaggaggttggggctgaatctgctgaaggggaggatgg 1334
Query: 762 tgatgaaggagatga 776
|||||||||||||||
Sbjct: 1335 tgatgaaggagatga 1349
>30099.m001691 tubulin alpha chain, putative
Length = 1353
Score = 603 bits (304), Expect = e-172
Identities = 556/640 (86%)
Strand = Plus / Plus
Query: 106 cttaaccgccttgtatctcaggtcatctcatccctcactgcctctttgaggtttgatggt 165
|||||| | ||||| || ||||| ||||| ||| | ||||| ||||||||||| ||||||
Sbjct: 679 cttaacaggcttgtctcccaggtgatctcttccttgactgcatctttgaggttcgatggt 738
Query: 166 gctcttaatgtggatgtcactgagttccagaccaacttggttccctatcccaggatccat 225
||| | ||||||||||| ||||| ||||||||||||||||| ||||| || || |||||
Sbjct: 739 gctttgaatgtggatgtgactgaattccagaccaacttggtcccctacccaagaatccac 798
Query: 226 ttcatgctttcctcttatgcccccgtgatatcagctgagaaggcatatcacgagcaacta 285
||||||||||| || ||||| || || || ||||||||||| || || || || |||||
Sbjct: 799 ttcatgctttcttcctatgcaccagtcatctcagctgagaaagcttaccatgaacaactt 858
Query: 286 tctgttgctgagattacaaatagtgcctttgagccttcatccatgatggccaagtgtgac 345
|| || ||||| || || || ||||| |||||||| |||||||||||||||||||||||
Sbjct: 859 tcagtagctgaaatcaccaacagtgcttttgagccctcatccatgatggccaagtgtgat 918
Query: 346 ccacgccatggcaagtacatggcttgctgcctgatgtaccgtggtgatgttgtgcccaag 405
|| |||||||||||||| ||||||||||| |||||||||||||||||||||||||||||
Sbjct: 919 cctcgccatggcaagtatatggcttgctgtttgatgtaccgtggtgatgttgtgcccaag 978
Query: 406 gatgtgaatgcagctgtggccaccatcaagactaagcggactatccagtttgttgattgg 465
||||| ||||| || || || || |||||||||||||| ||||| ||||||||||| |||
Sbjct: 979 gatgtcaatgctgcagttgctactatcaagactaagcgcactattcagtttgttgactgg 1038
Query: 466 tgccctactggattcaagtgtggcatcaactaccagccaccaactgttgttccaggaggt 525
||||| |||||||||||||| || ||||| ||||||||||| |||||||| || || |||
Sbjct: 1039 tgcccaactggattcaagtgcggtatcaattaccagccacctactgttgtccctggtggt 1098
Query: 526 gaccttgccaaggtgcagagggctgtatgtatgatctccaattctacaagcgttgcagaa 585
|||||||| ||||||||||||||||| || |||||||| || || || |||||||| |||
Sbjct: 1099 gaccttgctaaggtgcagagggctgtttgcatgatctctaactcaaccagcgttgctgaa 1158
Query: 586 gtcttctcccgtattgaccacaagttcgatctcatgtatgctaagcgtgcctttgtccat 645
|| ||||||||||||||||||||||| ||||| |||||||| |||||||| ||||| ||
Sbjct: 1159 gtgttctcccgtattgaccacaagtttgatcttatgtatgccaagcgtgcttttgttcac 1218
Query: 646 tggtatgttggtgagggcatggaagaaggagagttctcagaggcccgtgaggatcttgct 705
||||||||||||||||| ||||| |||||||| ||||| ||||| |||||||||||||||
Sbjct: 1219 tggtatgttggtgagggtatggaggaaggagaattctctgaggctcgtgaggatcttgct 1278
Query: 706 gctctggagaaggattatgaggaggttggtgctgaatctg 745
||||| |||||||||||||| || ||||||||||||||||
Sbjct: 1279 gctcttgagaaggattatgaagaagttggtgctgaatctg 1318
>30084.m000186 tubulin alpha chain, putative
Length = 1350
Score = 301 bits (152), Expect = 3e-81
Identities = 479/588 (81%)
Strand = Plus / Plus
Query: 154 aggtttgatggtgctcttaatgtggatgtcactgagttccagaccaacttggttccctat 213
||||||||||| || | ||||||||| | || ||||||||||| ||| | || || |||
Sbjct: 727 aggtttgatggagccataaatgtggatattacagagttccagactaacctcgtgccatat 786
Query: 214 cccaggatccatttcatgctttcctcttatgcccccgtgatatcagctgagaaggcatat 273
|| | || || ||||||||||| || || || || || || |||||||| ||||||||
Sbjct: 787 ccacgtattcacttcatgctttcttcatacgctccagtcatctcagctgaaaaggcatac 846
Query: 274 cacgagcaactatctgttgctgagattacaaatagtgcctttgagccttcatccatgatg 333
|| ||||| | |||||| |||||||||||||| || || ||||||||| |||||||
Sbjct: 847 catgagcagttgtctgttcctgagattacaaatgctgttttcgagccttcaagcatgatg 906
Query: 334 gccaagtgtgacccacgccatggcaagtacatggcttgctgcctgatgtaccgtggtgat 393
|| ||||||||||| | ||||| || || ||||| |||||| |||||||||| || |||
Sbjct: 907 gctaagtgtgaccctaggcatgggaaatatatggcatgctgcttgatgtaccggggagat 966
Query: 394 gttgtgcccaaggatgtgaatgcagctgtggccaccatcaagactaagcggactatccag 453
||||| ||||||||||| ||||| || || ||||||||||| |||||| ||||| | |||
Sbjct: 967 gttgttcccaaggatgtcaatgccgccgttgccaccatcaaaactaagaggactgttcag 1026
Query: 454 tttgttgattggtgccctactggattcaagtgtggcatcaactaccagccaccaactgtt 513
|| ||||||||||| || || || ||||| ||||| ||||| || ||||| ||| | ||
Sbjct: 1027 ttcgttgattggtgtccaaccggcttcaaatgtggtatcaattatcagcctccatcagta 1086
Query: 514 gttccaggaggtgaccttgccaaggtgcagagggctgtatgtatgatctccaattctaca 573
|| || |||||||| ||||||||||||||| | ||||| || |||||| |||| |||
Sbjct: 1087 gtacctggaggtgatcttgccaaggtgcagcgtgctgtttgcatgatcagcaataacaca 1146
Query: 574 agcgttgcagaagtcttctcccgtattgaccacaagttcgatctcatgtatgctaagcgt 633
|| || ||||||||||| || ||||||||||| || |||||||||||||| ||| |
Sbjct: 1147 gcagtggctgaagtcttctctcgcattgaccacaaatttgatctcatgtatgccaagagg 1206
Query: 634 gcctttgtccattggtatgttggtgagggcatggaagaaggagagttctcagaggcccgt 693
|| ||||| || |||||||||||||| ||||||||||| ||||| |||||||| || |||
Sbjct: 1207 gcatttgttcactggtatgttggtgaaggcatggaagagggagaattctcagaagctcgt 1266
Query: 694 gaggatcttgctgctctggagaaggattatgaggaggttggtgctgaa 741
|| ||||| ||||| || ||||| ||||||||||| ||||||||||||
Sbjct: 1267 gaagatctggctgcccttgagaaagattatgaggaagttggtgctgaa 1314
>29950.m001120 tubulin alpha chain, putative
Length = 1350
Score = 280 bits (141), Expect = 1e-74
Identities = 474/585 (81%)
Strand = Plus / Plus
Query: 157 tttgatggtgctcttaatgtggatgtcactgagttccagaccaacttggttccctatccc 216
||||||||||| ||||||||||||| |||||||| || || ||| | || || |||||
Sbjct: 730 tttgatggtgccattaatgtggatgttactgagtttcaaactaacctcgtgccatatcct 789
Query: 217 aggatccatttcatgctttcctcttatgcccccgtgatatcagctgagaaggcatatcac 276
| |||||||| ||||| || ||||||||||| || |||||||||| |||||| | ||
Sbjct: 790 cgaatccattttatgctctcttcttatgccccagtaatatcagctgcgaaggctttccat 849
Query: 277 gagcaactatctgttgctgagattacaaatagtgcctttgagccttcatccatgatggcc 336
|| || ||||| ||| ||||||| |||| | || |||||||| ||| ||||||||||
Sbjct: 850 gaacagctatcagttcctgagatcacaagtgctgtgtttgagccctcaagcatgatggcc 909
Query: 337 aagtgtgacccacgccatggcaagtacatggcttgctgcctgatgtaccgtggtgatgtt 396
|| || ||||| | ||||| ||||| |||||||| ||||| ||||| ||||| ||||||
Sbjct: 910 aaatgcgacccgaggcatgggaagtatatggcttgttgcctaatgtatcgtggagatgtt 969
Query: 397 gtgcccaaggatgtgaatgcagctgtggccaccatcaagactaagcggactatccagttt 456
||||| |||||||| ||||| ||||| |||||||| ||||| ||| |||| | || |||
Sbjct: 970 gtgccaaaggatgttaatgctgctgttgccaccattaagacaaagaggacagttcaattt 1029
Query: 457 gttgattggtgccctactggattcaagtgtggcatcaactaccagccaccaactgttgtt 516
||||| |||||||| ||||| |||||||| || ||||||||||||||||| || || ||
Sbjct: 1030 gttgactggtgcccaactggtttcaagtgcggtatcaactaccagccaccgacagtagta 1089
Query: 517 ccaggaggtgaccttgccaaggtgcagagggctgtatgtatgatctccaattctacaagc 576
|| |||||||| ||||| ||||||||| | || || |||||||| ||| ||||
Sbjct: 1090 cctggaggtgatcttgctaaggtgcagcgtgcagtttgtatgataagcaacaatacagct 1149
Query: 577 gttgcagaagtcttctcccgtattgaccacaagttcgatctcatgtatgctaagcgtgcc 636
|| || || || |||||| | ||||||||||| || |||||||||||||| ||||| ||
Sbjct: 1150 gtagctgaggttttctccagaattgaccacaaatttgatctcatgtatgccaagcgagca 1209
Query: 637 tttgtccattggtatgttggtgagggcatggaagaaggagagttctcagaggcccgtgag 696
||||| || ||||||||||| || |||||||| ||||| || || ||||| || |||||
Sbjct: 1210 tttgtgcactggtatgttggggaaggcatggaggaaggtgaattttcagaagctcgtgaa 1269
Query: 697 gatcttgctgctctggagaaggattatgaggaggttggtgctgaa 741
|||||||||||||| ||||| || || ||||| ||||| ||||||
Sbjct: 1270 gatcttgctgctcttgagaaagactacgaggaagttggcgctgaa 1314
>29822.m003495 tubulin alpha chain, putative
Length = 1353
Score = 218 bits (110), Expect = 4e-56
Identities = 385/476 (80%), Gaps = 3/476 (0%)
Strand = Plus / Plus
Query: 307 agtgcctttgagccttcatccatgatggccaagtgtgacccacgccatggcaagtacatg 366
||||||||||| || || || |||||||| || || || || |||||||| |||||||||
Sbjct: 880 agtgcctttgaaccatcttcaatgatggcaaaatgcgatcctcgccatggtaagtacatg 939
Query: 367 gcttgctgcctgatgtaccgtggtgatgttgtgcccaaggatgtgaatgcagctgtggcc 426
|| || || |||||||| | || ||||| ||||| |||||||| ||||| || || ||
Sbjct: 940 gcatgttgtttgatgtacagaggagatgtagtgccaaaggatgtaaatgctgcagttgct 999
Query: 427 accatcaagactaagcggactatccagtttgttgattggtgccctactggattcaagtgt 486
|| ||||| |||||| |||| || || ||||| |||||||| || ||||| ||||| |||
Sbjct: 1000 acaatcaaaactaagaggacaattcaatttgtggattggtgtcccactgggttcaaatgt 1059
Query: 487 ggcatcaactaccagccaccaactgttgttccaggaggtgaccttgccaaggtgcagagg 546
|||||||| || ||||| || ||||||||||| ||||| || | || || || || |||
Sbjct: 1060 ggcatcaattatcagcctcctactgttgttcctggaggagatttggctaaagttcaaagg 1119
Query: 547 gctgtatgtatgatctccaattctacaagcgttgcagaagtcttctcccgtattgaccac 606
|| || || ||||| || ||||| || || ||||| ||||| ||||| | ||||| ||
Sbjct: 1120 gcagtttgcatgatttcaaattcaactagtgttgctgaagtgttctctaggattgatcat 1179
Query: 607 aagttcgatctcatgtatgctaagcgtgcctttgtccattggtatgttggtgagggcatg 666
||||| ||||| |||||||| |||||||| || || |||||||||||||||||||| |||
Sbjct: 1180 aagtttgatcttatgtatgcaaagcgtgctttcgtgcattggtatgttggtgagggtatg 1239
Query: 667 gaagaaggagagttctcagaggcccgtgaggatcttgctgctctggagaaggattatgag 726
|| ||||| || ||||| || || | |||||| | ||||||||||||||||| |||||
Sbjct: 1240 gaggaaggtgaattctctgaagctagagaggatttggctgctctggagaaggactatgaa 1299
Query: 727 gaggttggtgctgaatctgccgaaggagaggatggtgatgaaggagatgagtacta 782
|| ||||| || |||||||| |||||| |||| ||||||||||||||| |||||
Sbjct: 1300 gaagttggagcagaatctgctgaagga---gatgatgatgaaggagatgaatacta 1352