Jatropha Genome Database
- JcCA0154651.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0154651.10 + phase: 1 /partial
(545 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30170.m013632 conserved hypothetical protein 466 e-131
28359.m000279 conserved hypothetical protein 242 2e-63
29955.m001180 conserved hypothetical protein 66 2e-10
29955.m001179 conserved hypothetical protein 62 4e-09
>30170.m013632 conserved hypothetical protein
Length = 2289
Score = 466 bits (235), Expect = e-131
Identities = 466/543 (85%)
Strand = Plus / Plus
Query: 3 agcatcatggagccattccgtagacacctctacacttacatttctctatctggtccacag 62
||||| ||||| ||||| | |||||||||||||| || ||||| ||||||||||||||
Sbjct: 1744 agcattatggaaccattacaaagacacctctacacatatgtttctatatctggtccacag 1803
Query: 63 ttggggtatctttacagttctaattctttattcaactccgggatgtggtttatgaaaaag 122
||||||||||||||||| || || |||||||| || || ||||||||||||||||| |||
Sbjct: 1804 ttggggtatctttacagctcgaactctttatttaattctgggatgtggtttatgaagaag 1863
Query: 123 ttcagaggaacacagtgcattcatcaactcactttcacagatgatccaaatctcaaaaac 182
|||| ||||| |||||||||||||| ||||||||||| || || ||||||||| |||||
Sbjct: 1864 ttcaaaggaaatcagtgcattcatcagctcactttcacggacgacccaaatctccaaaac 1923
Query: 183 actttcttttacaggctttgtgagcagaagacactagagaatttcaggcacataatattg 242
|| ||||| ||||| || |||||| |||||||| |||||||||||| || ||||| ||
Sbjct: 1924 accttcttctacagactctgtgagaagaagacattagagaatttcaaacatgtaatactg 1983
Query: 243 atttcttcaccccaggacggttatgtgccatatcattctgccagaattgaattatgccga 302
|||||||| |||||||| |||||||||||||| ||||| |||||||| || |||||||||
Sbjct: 1984 atttcttctccccaggatggttatgtgccataccattcagccagaatggagttatgccga 2043
Query: 303 gctgcttcgttggattattcaagaaagggcagaatattcctggagatgttgaataattgc 362
||||||| ||||||| ||||| ||||||||| |||| ||||||||| |||| ||||||
Sbjct: 2044 tctgcttccatggattactcaaggaagggcagagtatttctggagatgctgaacaattgc 2103
Query: 363 ttggatcagatacgggctccgacctcccagccacgggtgttcatgcgctgtgatgtcaac 422
|| |||||||||||||| || ||||| ||| |||||| |||||||||||||||||||||
Sbjct: 2104 ttagatcagatacgggccccaacctcagagcaacgggtattcatgcgctgtgatgtcaac 2163
Query: 423 tttgatacctctaaccacgggagaaactttaactctttcattgggcgaactgctcacatt 482
|||||||| ||| | | || | ||||||||| ||||||| ||||| |||| || |||
Sbjct: 2164 tttgatacatcttcctatggcaagaactttaacactttcatcgggcgggctgcccatatt 2223
Query: 483 gagttcctagagtctgatatttttgcaaggttcataatgtggtctttccaggaactattt 542
|||||| | ||||||||||| | | ||||||||||||||||||||||||||||||||||
Sbjct: 2224 gagttcttggagtctgatatatacgtaaggttcataatgtggtctttccaggaactattt 2283
Query: 543 cgt 545
|||
Sbjct: 2284 cgt 2286
>28359.m000279 conserved hypothetical protein
Length = 2427
Score = 242 bits (122), Expect = 2e-63
Identities = 395/486 (81%)
Strand = Plus / Plus
Query: 51 tctggtccacagttggggtatctttacagttctaattctttattcaactccgggatgtgg 110
||||| ||||| ||||| || ||||||||||| || |||||||| ||||| |||||||||
Sbjct: 1930 tctggcccacacttgggttacctttacagttcgaactctttatttaactctgggatgtgg 1989
Query: 111 tttatgaaaaagttcagaggaacacagtgcattcatcaactcactttcacagatgatcca 170
|| |||||||| ||| ||| ||||||| |||||||| || || || || ||||| |||
Sbjct: 1990 cttttgaaaaagctcaagggatcacagtgtattcatcagcttacgtttactgatgaccca 2049
Query: 171 aatctcaaaaacactttcttttacaggctttgtgagcagaagacactagagaatttcagg 230
|||| || |||||| | |||||||||||||||||||||||||||||||||||||||
Sbjct: 2050 gatcttcggaaaactttcatgtacaggctttgtgagcagaagacactagagaatttcagg 2109
Query: 231 cacataatattgatttcttcaccccaggacggttatgtgccatatcattctgccagaatt 290
|| || ||| | | |||||| ||||||| |||||||| ||| | |||||||||||||||
Sbjct: 2110 catattatactactatcttcagcccaggatggttatgttccacaccattctgccagaatt 2169
Query: 291 gaattatgccgagctgcttcgttggattattcaagaaagggcagaatattcctggagatg 350
||||| |||| |||||||| ||||| || |||| |||||| | ||||||| ||||||
Sbjct: 2170 gaattgtgccaggctgcttccttggactactcaaaaaagggtgcagtattcctagagatg 2229
Query: 351 ttgaataattgcttggatcagatacgggctccgacctcccagccacgggtgttcatgcgc 410
||||||| ||| | || |||||||| || |||||||| || || | ||||||||
Sbjct: 2230 ctgaataactgcctagaccagatacgagccccgacctctgagaatcgtcttttcatgcgt 2289
Query: 411 tgtgatgtcaactttgatacctctaaccacgggagaaactttaactctttcattgggcga 470
|||||||||||||| |||||||| | || || | |||||| | ||||||||||
Sbjct: 2290 tgtgatgtcaacttcgatacctcctcttatggcaggagctttaatgcactcattgggcgc 2349
Query: 471 actgctcacattgagttcctagagtctgatatttttgcaaggttcataatgtggtctttc 530
|||| || ||||||||| | |||||||| |||||||||| |||||||||||||||||||
Sbjct: 2350 gctgcccatattgagttcttggagtctgacatttttgcaaagttcataatgtggtctttc 2409
Query: 531 caggaa 536
| ||||
Sbjct: 2410 ccggaa 2415
>29955.m001180 conserved hypothetical protein
Length = 2067
Score = 65.9 bits (33), Expect = 2e-10
Identities = 177/225 (78%)
Strand = Plus / Plus
Query: 4 gcatcatggagccattccgtagacacctctacacttacatttctctatctggtccacagt 63
|||||||||| |||| || ||| || | ||||| || |||||| ||||||||||||| |
Sbjct: 1808 gcatcatggaaccatacctgagatacttgtacacatatatttctatatctggtccacact 1867
Query: 64 tggggtatctttacagttctaattctttattcaactccgggatgtggtttatgaaaaagt 123
|||||||| | ||| |||| || || ||||| || || ||| ||||| | |||| | |
Sbjct: 1868 tggggtatatgtactgttcaaactcattatttaattctgggttgtggctcttgaagacgc 1927
Query: 124 tcagaggaacacagtgcattcatcaactcactttcacagatgatccaaatctcaaaaaca 183
| | || ||||||||||||||||| || |||||| ||||||||||| |||| | ||||
Sbjct: 1928 ttaagggcacacagtgcattcatcagcttactttctcagatgatccagatcttatgaaca 1987
Query: 184 ctttcttttacaggctttgtgagcagaagacactagagaatttca 228
| ||||| |||| ||| || || ||| |||||| ||||| ||||
Sbjct: 1988 cattcttatacaaacttagtaaggagaggacactggagaacttca 2032
>29955.m001179 conserved hypothetical protein
Length = 444
Score = 61.9 bits (31), Expect = 4e-09
Identities = 37/39 (94%)
Strand = Plus / Minus
Query: 255 caggacggttatgtgccatatcattctgccagaattgaa 293
||||| |||||||| ||||||||||||||||||||||||
Sbjct: 432 caggatggttatgttccatatcattctgccagaattgaa 394