Jatropha Genome Database

JcCA0154181.30
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0154181.30 + phase: 0 
         (486 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29681.m001337 undecaprenyl pyrophosphate synthetase, putative          90   1e-17

>29681.m001337 undecaprenyl pyrophosphate synthetase, putative
          Length = 933

 Score = 89.7 bits (45), Expect = 1e-17
 Identities = 120/145 (82%)
 Strand = Plus / Plus

                                                                       
Query: 304 catgaggctggtggacggacattgacggatattgtgaagctttgctggcaatgggggatt 363
           ||||||||||| | |||  |||||| ||| ||| |||| |||||  | || |||||||||
Sbjct: 310 catgaggctggcgtacgctcattgatggagattatgaacctttgtggtcactgggggatt 369

                                                                       
Query: 364 aaagttcttactgtttttgcgttttcctgcgataattggacgaggccccaggtggaggtt 423
           ||||||||||| |||||||| ||||| || || |||||||| |||||  |||||||| | 
Sbjct: 370 aaagttcttacagtttttgccttttcttgtgagaattggactaggcctaaggtggagatc 429

                                    
Query: 424 gatttcctgatgagtttgttcgaaa 448
           || ||| ||||||||||||| ||||
Sbjct: 430 gacttcttgatgagtttgtttgaaa 454