Jatropha Genome Database
- JcCA0154181.20
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0154181.20 - phase: 0
(1704 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29681.m001338 DNA damage-binding protein, putative 1608 0.0
>29681.m001338 DNA damage-binding protein, putative
Length = 1677
Score = 1608 bits (811), Expect = 0.0
Identities = 1300/1463 (88%)
Strand = Plus / Plus
Query: 181 aaaaatgaagaggatttgggttccaagaagaaagggaaagcacccattactattagtctc 240
||||||||||||||||||| |||||| |||||| |||||||||||||||| |||||||||
Sbjct: 148 aaaaatgaagaggatttggattccaacaagaaatggaaagcacccattacgattagtctc 207
Query: 241 aagaaagtctgcaaagtttgtaagaaaccgggtcatgaagcgggattcaaaggagctaca 300
|||||||||||||||||||| |||||||| ||||||||||| || || || ||||||||
Sbjct: 208 aagaaagtctgcaaagtttgcaagaaacctggtcatgaagctggttttaagggagctact 267
Query: 301 tacatagactgtcctatgaagccctgctttctctgcaaaatgcctgggcacactacgatt 360
||||| || || |||||||| || |||||||||||||||||||| || |||||||| |||
Sbjct: 268 tacattgattgccctatgaaaccttgctttctctgcaaaatgcccggccacactacaatt 327
Query: 361 acttgcccacatagagtggctactgaatatggggtcatcccagcaccccaaagaaatacg 420
| ||||| ||||||||||||| |||| ||||| ||||| | ||||| |||||||||||
Sbjct: 328 tcatgcccgcatagagtggctattgaaaatgggatcatctctgcaccgcaaagaaatact 387
Query: 421 cataacccattggaatatgtcttccagcgccagctcagaccgcacatccctccaataaag 480
|| || ||||| ||||||| |||||||||||||| || || |||||||| |||||||
Sbjct: 388 cacaatacattgcaatatgttttccagcgccagcttaggcctagcatccctcaaataaag 447
Query: 481 ccaccatttgtcgttccagatcaagtatgttgcgcagttatcaggtatcacagtaggcgg 540
||| ||| |||| | || || ||||| || || |||||||||||||| ||||| ||||||
Sbjct: 448 ccaacatatgtcataccggaccaagtgtgctgtgcagttatcaggtaccacagcaggcgg 507
Query: 541 gtgacatgtttggaattccacccaacaaaaaataacgtccttttatctggggataagaaa 600
|||||||||||||||||||||||||||||||||||| | |||||||| ||||||||||||
Sbjct: 508 gtgacatgtttggaattccacccaacaaaaaataacattcttttatccggggataagaaa 567
Query: 601 ggacaagttggagtttgggattttgagaaagtgcatgagaaaatggtatatggaaacata 660
|||||||||||||| ||||||||||| |||||||||||||||||| | |||||||| |||
Sbjct: 568 ggacaagttggagtctgggattttgacaaagtgcatgagaaaatgatttatggaaatata 627
Query: 661 cacacttgtattgtcaataacatgaggtttaaaccttcaaatgatggtacggtgtatgct 720
||||| |||||||||||||||||||| ||||| |||||||||||||||| | ||||||||
Sbjct: 628 cacacatgtattgtcaataacatgagatttaacccttcaaatgatggtatgatgtatgct 687
Query: 721 gcatcctcagatggaactattagttgcactgacatggagactggaatttcaacatctttg 780
||||||||||||||||| || ||||| |||||||||||||||||||| ||| ||||| ||
Sbjct: 688 gcatcctcagatggaacaatcagttgtactgacatggagactggaatctcatcatctctg 747
Query: 781 atgaaccttaaccctgatgggtggcagggaccgagcagttggagaatgctttatggcatg 840
||||||||||||||||| |||||||||||||| || | ||||||||||||||||| |||
Sbjct: 748 atgaaccttaaccctgacgggtggcagggaccaagaaactggagaatgctttatggtatg 807
Query: 841 gatatcaactcagaaaaaggtgttgtgcttgtagctgataattttggttttctctacata 900
||||||||| |||| |||||||||||| |||| ||||| || ||||| |||||||| ||
Sbjct: 808 gatatcaacacagagaaaggtgttgtggttgttgctgacaactttggctttctctatatg 867
Query: 901 gttgatatgcgctccaacagtaaaactgggcaaccaatcttgatccataagaaaggtagc 960
| |||||||||| |||| ||||| |||| | |||||| ||||| |||||||| |||
Sbjct: 868 ctggatatgcgcttgaacaataaaattgggaaggaaatcttaatccacaagaaaggcagc 927
Query: 961 aaagttgttggccttcattgcaatccagttcatccagagcttcttttgagctgtggaaat 1020
||||| |||||||||||||||||||||||||||||||||||| | |||||||||||||||
Sbjct: 928 aaagtagttggccttcattgcaatccagttcatccagagcttttgttgagctgtggaaat 987
Query: 1021 gatcattttgctcgcatttgggatatgcgtcgacttgaagctggatcttctctttgtgat 1080
|||||||||||||| || ||||| |||||| |||||||||||||||||||||||||||
Sbjct: 988 gatcattttgctcgtatatgggacttgcgtcaacttgaagctggatcttctctttgtgac 1047
Query: 1081 cttgtgcacaaacgtgttgttaattgtgcatatttctctccattgtctgggagcaaaatt 1140
|||| ||||||||| ||||||||||||||||||||||||||| ||||||| |||||||||
Sbjct: 1048 cttgagcacaaacgagttgttaattgtgcatatttctctccactgtctggcagcaaaatt 1107
Query: 1141 cttaccacctctcaagataaccgtcttcgtgtatgggattctatctttggaaatttggat 1200
|||||||| || || |||||||| |||||||||||||||||||||||||| |||||||||
Sbjct: 1108 cttaccacttcacaggataaccgacttcgtgtatgggattctatctttgggaatttggat 1167
Query: 1201 tccccaagccgagagattgtacatagtcatgatttcaacagacatctaactccttttcga 1260
|||||||| |||||||||||||| ||||||||||||||||||||||| ||||||||||||
Sbjct: 1168 tccccaagtcgagagattgtacacagtcatgatttcaacagacatcttactccttttcga 1227
Query: 1261 gctgaatgggatcctaaggatccttcagaatcccttgcagttattggtcgttatataagt 1320
|||||||||||||||||||| || ||||| ||||||||||||||||||||||||||||||
Sbjct: 1228 gctgaatgggatcctaaggacccctcagagtcccttgcagttattggtcgttatataagt 1287
Query: 1321 gaaaattacaatggtgctgctttgcatcccattgatttcatagataccagcaatgggcaa 1380
||||||||||||||| ||||||||||||| ||||||||| ||||| ||||| |||| ||
Sbjct: 1288 gaaaattacaatggtactgctttgcatcctattgatttcgtagatgtcagcactgggaaa 1347
Query: 1381 ctagttgctgaagttatggatcctaacatcacaactattactcctgtaaacaagctacac 1440
||||| ||||||||||||||||| || ||||||||||||| |||||| ||||||||||||
Sbjct: 1348 ctagtcgctgaagttatggatccaaatatcacaactattagtcctgtgaacaagctacac 1407
Query: 1441 cctcgagatgatattttggcatctggcagttcaaggtcccttttcatttggaagccgaag 1500
||||| |||||||||||||| ||||||||||||||||| || || || ||||||||||||
Sbjct: 1408 cctcgggatgatattttggcgtctggcagttcaaggtctctctttatctggaagccgaag 1467
Query: 1501 gacaaatctgaacttgcagaacagaaggaagataggcagattgttatttgtggaaatgct 1560
|| || |||||| || |||| ||||||| || | | |||||||||||||| | | |
Sbjct: 1468 gagaagtctgaagctgtagaagagaaggatgagaagaagattgttatttgtcaaggcgat 1527
Query: 1561 gagaagaagtccaaacggaagtttgggggtggaagtgatgatgattctgatgatgatgga 1620
||||||||||||||| ||||||||||||| | ||||||||||||||||||| ||||||
Sbjct: 1528 gagaagaagtccaaaaggaagtttgggggcgaaagtgatgatgattctgataatgatgat 1587
Query: 1621 ttattcaaatccaaaggcaagaa 1643
||||| |||||||||||||||||
Sbjct: 1588 ttatttaaatccaaaggcaagaa 1610
Score = 60.0 bits (30), Expect = 5e-08
Identities = 66/78 (84%)
Strand = Plus / Plus
Query: 1 atggccccacaaacgagaagaatggcatttccaaaggtagtgattgagagggaaacagat 60
||||| || ||||||||| |||||| |||||| || || |||||||||||||| || ||
Sbjct: 1 atggcaccgcaaacgagaggaatgggatttccgaaagtggtgattgagagggacacggac 60
Query: 61 tctgaacagagctcatca 78
||||| || |||||||||
Sbjct: 61 tctgagcaaagctcatca 78