Jatropha Genome Database

JcCA0154071.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0154071.10 + phase: 2 /partial
         (424 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29647.m002022 TRANSPORT INHIBITOR RESPONSE 1 protein, putative        553   e-157

>29647.m002022 TRANSPORT INHIBITOR RESPONSE 1 protein, putative
          Length = 1758

 Score =  553 bits (279), Expect = e-157
 Identities = 384/419 (91%)
 Strand = Plus / Plus

                                                                        
Query: 5    cgtgtttttgagtacattggaacttatgccaaaaagttagaaatgctctctgtagccttt 64
            ||||| |||||||||||||||||| |||| |||||| |||| ||||| |||||||| |||
Sbjct: 1336 cgtgtgtttgagtacattggaactcatgctaaaaagctagagatgctatctgtagctttt 1395

                                                                        
Query: 65   gccggagatagtgatttggggctccatcatgtgatgtctggatgtgaaaacctacgcaaa 124
            || |||||||||||| | || |||||||||||| | ||||| ||||||||||| ||||||
Sbjct: 1396 gctggagatagtgatcttggactccatcatgtgctctctgggtgtgaaaaccttcgcaaa 1455

                                                                        
Query: 125  ctagagattcgagattgtccatttggggacaaggctcttttggccaatgctgcaaagctg 184
            ||||||||| ||||||| || |||||||||||||||||||||||||||||||||||||||
Sbjct: 1456 ctagagattagagattgcccctttggggacaaggctcttttggccaatgctgcaaagctg 1515

                                                                        
Query: 185  gagacaatgcgatccctttggatgtcttcttgctcggtgagttacggagcatgtaaattg 244
            |||||||||||||||||||||||||||||||||||||||||||| |||||||||||  ||
Sbjct: 1516 gagacaatgcgatccctttggatgtcttcttgctcggtgagttatggagcatgtaagctg 1575

                                                                        
Query: 245  ctaggtcagaagatgcctaggctcaatgttgaagttattgatgagaggggacctccagat 304
            ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 1576 ctaggtcagaagatgcctaggctgaatgttgaagttattgatgagaggggacctccagat 1635

                                                                        
Query: 305  tcaaggccagaaagttgtccagttgagaagctttacatctataggactgtcgctgggcct 364
             | ||||||||||||||||| ||||||||||||||||||||||| | ||| |||||||||
Sbjct: 1636 acgaggccagaaagttgtcctgttgagaagctttacatctatagaagtgttgctgggcct 1695

                                                                       
Query: 365  agattcgacatgcctggttttgtttggacaatggatgaagattctgcattgaggctttc 423
             | || || ||||||||||||||||  ||||||||||||||||||||||||||| ||||
Sbjct: 1696 cggtttgatatgcctggttttgtttatacaatggatgaagattctgcattgaggttttc 1754