Jatropha Genome Database
- JcCA0153521.40
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0153521.40 + phase: 0 /partial
(448 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29929.m004749 r2r3-myb transcription factor, putative 383 e-106
29633.m000891 r2r3-myb transcription factor, putative 96 2e-19
28154.m000040 r2r3-myb transcription factor, putative 86 2e-16
30147.m013885 r2r3-myb transcription factor, putative 72 3e-12
29005.m000265 r2r3-myb transcription factor, putative 70 1e-11
30225.m001683 r2r3-myb transcription factor, putative 66 2e-10
29680.m001686 r2r3-myb transcription factor, putative 62 3e-09
29889.m003258 r2r3-myb transcription factor, putative 60 1e-08
30076.m004682 r2r3-myb transcription factor, putative 58 5e-08
28271.m000023 DNA binding protein, putative 58 5e-08
>29929.m004749 r2r3-myb transcription factor, putative
Length = 441
Score = 383 bits (193), Expect = e-106
Identities = 331/377 (87%)
Strand = Plus / Plus
Query: 1 atgggaagacaaccttgttgtgacaaaattggattgaagagaggtccatggactatcgaa 60
||||||||||| ||||||||||| || |||||||||||||||||||||||||||| |||
Sbjct: 1 atgggaagacagccttgttgtgataaggttggattgaagagaggtccatggactattgaa 60
Query: 61 gaagaccaaaagcttatgaacttcattctcaacaatggaatccaatgttggagacttgtc 120
||||| || ||||| ||||| ||||| ||||||||||| || || || ||| |||| ||
Sbjct: 61 gaagatcataagctcatgaatttcatcctcaacaatgggattcagtgctggcgactggtt 120
Query: 121 ccaaaacttgcaggtttattaaggtgtgggaagagttgcagattgagatggatgaattac 180
|| ||||||||||| |||||||| ||||| ||||| ||||||||||||||||||||||||
Sbjct: 121 ccgaaacttgcagggttattaagatgtggaaagagctgcagattgagatggatgaattac 180
Query: 181 ttgaggcctgatcttaaaagaggagctttaacagaatcagaagaagatcaaataatcgaa 240
|||| |||||| | || |||||||| ||||||||| | |||||||||||||| ||||||
Sbjct: 181 ctgagacctgatttgaagagaggagcattaacagaagctgaagaagatcaaatcatcgaa 240
Query: 241 ctccattcgcgtttgggtaacaggtggtctaaaattgctgcacattttccaggccgtaca 300
||||||||||||||||| |||| |||||| || ||||||||||||||||||||| | |||
Sbjct: 241 ctccattcgcgtttgggaaacaagtggtcaaagattgctgcacattttccaggcagaaca 300
Query: 301 gataatgaaataaagaaccattggaatataagaattaagaagaaactaaagattcttggt 360
|||||||| || || ||||||||||||| |||||| |||||||||||||||| ||| |||
Sbjct: 301 gataatgagattaaaaaccattggaatacaagaatcaagaagaaactaaagactctgggt 360
Query: 361 atagacccacaaaccca 377
||||||| ||||||||
Sbjct: 361 gtagaccctcaaaccca 377
>29633.m000891 r2r3-myb transcription factor, putative
Length = 729
Score = 95.6 bits (48), Expect = 2e-19
Identities = 174/216 (80%)
Strand = Plus / Plus
Query: 1 atgggaagacaaccttgttgtgacaaaattggattgaagagaggtccatggactatcgaa 60
|||||||| |||||||| ||||| || ||||| | |||||||||||||||||||| |||
Sbjct: 1 atgggaaggcaaccttgctgtgataagattggtctcaagagaggtccatggactattgaa 60
Query: 61 gaagaccaaaagcttatgaacttcattctcaacaatggaatccaatgttggagacttgtc 120
||||| || ||||| |||||||| || || || ||||| || || || ||| || | ||
Sbjct: 61 gaagatcacaagctcatgaactttatccttaataatggtattcattgctggcgaatggtt 120
Query: 121 ccaaaacttgcaggtttattaaggtgtgggaagagttgcagattgagatggatgaattac 180
|| || ||||||||| | || | ||||| ||||| || ||| || ||||||| |||||
Sbjct: 121 cctaagcttgcaggtctgctacgatgtggaaagagctgtagactgcgatggattaattat 180
Query: 181 ttgaggcctgatcttaaaagaggagctttaacagaa 216
|||||||||||||||| ||||| | ||| ||||||
Sbjct: 181 ctgaggcctgatcttaagagaggtggtttcacagaa 216
>28154.m000040 r2r3-myb transcription factor, putative
Length = 906
Score = 85.7 bits (43), Expect = 2e-16
Identities = 55/59 (93%)
Strand = Plus / Plus
Query: 145 tgtgggaagagttgcagattgagatggatgaattacttgaggcctgatcttaaaagagg 203
||||| |||||||||||| | |||||||| |||||||||||||||||||||||||||||
Sbjct: 145 tgtggcaagagttgcagactcagatggataaattacttgaggcctgatcttaaaagagg 203
>30147.m013885 r2r3-myb transcription factor, putative
Length = 1137
Score = 71.9 bits (36), Expect = 3e-12
Identities = 57/64 (89%)
Strand = Plus / Plus
Query: 141 aaggtgtgggaagagttgcagattgagatggatgaattacttgaggcctgatcttaaaag 200
||||||||| ||||||||||||||||||||||| || ||||| || ||||| ||||| ||
Sbjct: 141 aaggtgtggaaagagttgcagattgagatggattaactacttaagacctgaccttaagag 200
Query: 201 agga 204
||||
Sbjct: 201 agga 204
>29005.m000265 r2r3-myb transcription factor, putative
Length = 297
Score = 69.9 bits (35), Expect = 1e-11
Identities = 141/175 (80%), Gaps = 6/175 (3%)
Strand = Plus / Plus
Query: 1 atgggaagacaaccttgttgtgacaaaattggattgaagagaggtccatggactatcgaa 60
|||||||||||||| |||||||||||| |||| ||||||| ||| |||||||| |||
Sbjct: 1 atgggaagacaaccatgttgtgacaaagttggtttgaagaaagggccatggacagctgaa 60
Query: 61 gaagaccaaaagcttatgaacttcattctcaacaatggaatccaatgt---tggagactt 117
||||| | || ||||| ||||| || || | |||||| ||||||| |||||| |
Sbjct: 61 gaagataagaaacttatcaactttatccttaccaatgg---ccaatgttgctggagagct 117
Query: 118 gtcccaaaacttgcaggtttattaaggtgtgggaagagttgcagattgagatgga 172
|| || || |||||||| || ||||||||||| ||||||||||| |||||||||
Sbjct: 118 gttcctaagcttgcaggattgttaaggtgtggaaagagttgcaggctgagatgga 172
>30225.m001683 r2r3-myb transcription factor, putative
Length = 657
Score = 65.9 bits (33), Expect = 2e-10
Identities = 54/61 (88%)
Strand = Plus / Plus
Query: 119 tcccaaaacttgcaggtttattaaggtgtgggaagagttgcagattgagatggatgaatt 178
|||| ||| |||||||| ||| |||||| |||||||||||||||||| ||||| ||||||
Sbjct: 119 tccctaaatttgcaggtctatcaaggtgcgggaagagttgcagattgcgatggttgaatt 178
Query: 179 a 179
|
Sbjct: 179 a 179
>29680.m001686 r2r3-myb transcription factor, putative
Length = 543
Score = 61.9 bits (31), Expect = 3e-09
Identities = 64/75 (85%)
Strand = Plus / Plus
Query: 130 gcaggtttattaaggtgtgggaagagttgcagattgagatggatgaattacttgaggcct 189
|||||| ||||||||||||| ||||||||||| | |||||||| || ||| |||||||
Sbjct: 130 gcaggtatattaaggtgtggaaagagttgcaggcttagatggataaactacctgaggcca 189
Query: 190 gatcttaaaagagga 204
||| ||||| |||||
Sbjct: 190 gatattaaacgagga 204
>29889.m003258 r2r3-myb transcription factor, putative
Length = 996
Score = 60.0 bits (30), Expect = 1e-08
Identities = 48/54 (88%)
Strand = Plus / Plus
Query: 129 tgcaggtttattaaggtgtgggaagagttgcagattgagatggatgaattactt 182
|||||| || ||||||||||| |||||||||||| |||||||||| || |||||
Sbjct: 129 tgcaggattgttaaggtgtggcaagagttgcagactgagatggattaactactt 182
>30076.m004682 r2r3-myb transcription factor, putative
Length = 282
Score = 58.0 bits (29), Expect = 5e-08
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 129 tgcaggtttattaaggtgtgggaagagttgcagattgagatggat 173
|||||| ||||| ||||||||||| ||||||||| ||||||||||
Sbjct: 129 tgcaggattattgaggtgtgggaaaagttgcagactgagatggat 173
>28271.m000023 DNA binding protein, putative
Length = 781
Score = 58.0 bits (29), Expect = 5e-08
Identities = 62/73 (84%)
Strand = Plus / Plus
Query: 253 ttgggtaacaggtggtctaaaattgctgcacattttccaggccgtacagataatgaaata 312
||||||||||||||||| |||||||| ||||| ||||| | ||||||||||||||
Sbjct: 295 ttgggtaacaggtggtcgaaaattgcacagcatttaccaggaagaacagataatgaaatc 354
Query: 313 aagaaccattgga 325
|||||| ||||||
Sbjct: 355 aagaactattgga 367