Jatropha Genome Database
- JcCA0153501.20
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0153501.20 + phase: 0 /pseudo/partial
(588 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29647.m002027 sodium/hydrogen exchanger, putative 371 e-102
30128.m008667 sodium/hydrogen exchanger, putative 105 3e-22
29726.m003982 sodium/hydrogen exchanger, putative 88 7e-17
27613.m000616 sodium/hydrogen exchanger, putative 56 2e-07
30128.m008729 sodium/hydrogen exchanger, putative 54 1e-06
>29647.m002027 sodium/hydrogen exchanger, putative
Length = 1611
Score = 371 bits (187), Expect = e-102
Identities = 361/419 (86%)
Strand = Plus / Plus
Query: 33 attggggctgaaatcaggatccgatgaagtccatgttgattctataactttgtttgttac 92
||||||||||| ||||||| | ||||||| ||| | |||||||| ||||| ||||| |
Sbjct: 30 attggggctgagatcaggacctgatgaagctcatatagattctattactttatttgtggc 89
Query: 93 acttatttgtgcttgcattatcattggtcatcttcttgagaagaatcgatggatgaatga 152
||| |||||||||||||| | ||||| |||||| |||||||||||||||||||||| ||
Sbjct: 90 tcttctttgtgcttgcattttgattggccatctttttgagaagaatcgatggatgaacga 149
Query: 153 gtcaattactgcccttgccattggactctgtactggggttattatactcctaactactca 212
|||||||||||||||| |||||| || |||||||||||||| || || ||| ||||| |
Sbjct: 150 atcaattactgcccttgtcattggtctgtgtactggggttataatcctgctagctactga 209
Query: 213 aggaaaaagttcacacctttttctattcgatgaacatcttttctttatatatgttcttcc 272
||||||||| ||||||||||||| ||| |||| | ||||| |||||||||||||||||
Sbjct: 210 aggaaaaagctcacacctttttcaatttagtgaagagcttttttttatatatgttcttcc 269
Query: 273 acctatcatttttaatgccgggttccaggttaaaaagaagcagttttttagaaactttat 332
|||||||||||| ||||| ||||||||||| |||||||||||||||||| ||||||||||
Sbjct: 270 acctatcattttcaatgctgggttccaggtaaaaaagaagcagttttttcgaaactttat 329
Query: 333 gacaatcgtgttatttggtgctgttgggactttaatatcctttatcatcatatcagtcgg 392
|||||| |||||||||||| |||||||||| | |||||||| |||||||||||| | ||
Sbjct: 330 cacaatcatgttatttggtgttgttgggactctgatatccttcatcatcatatcactggg 389
Query: 393 ttcagcaaagttattcaaaaaattaaatatcgacttcttggatacagtggattatctag 451
| ||| |||||||||| | |||| ||| || |||||||||||| ||||||||||||
Sbjct: 390 tgcagtgcagttattcaagacattaggtattgatttcttggatacaatggattatctag 448
>30128.m008667 sodium/hydrogen exchanger, putative
Length = 1635
Score = 105 bits (53), Expect = 3e-22
Identities = 230/289 (79%)
Strand = Plus / Plus
Query: 85 tttgttacacttatttgtgcttgcattatcattggtcatcttcttgagaagaatcgatgg 144
|||||||| || |||||||||| ||| | ||||||||||||||||| ||||||| |||
Sbjct: 85 tttgttactctcctttgtgcttgtattgttattggtcatcttcttgaagagaatcggtgg 144
Query: 145 atgaatgagtcaattactgcccttgccattggactctgtactggggttattatactccta 204
||||||||||| ||||| || |||| ||||| || ||||||| || |||| || ||
Sbjct: 145 atgaatgagtccattacagctcttgttattggtctaggtactggtattgttattctgctt 204
Query: 205 actactcaaggaaaaagttcacacctttttctattcgatgaacatcttttctttatatat 264
| || | |||||||| || || ||||| | ||| || ||||||||||||| |||
Sbjct: 205 attagtggtggaaaaagctcgcatcttttagtcttcagcgaggatcttttctttatttat 264
Query: 265 gttcttccacctatcatttttaatgccgggttccaggttaaaaagaagcagttttttaga 324
|||| || ||||| || |||||||| ||||| ||||| ||||||||||| || ||| |
Sbjct: 265 cttctaccgcctattatatttaatgctgggtttcaggtgaaaaagaagcaattctttcgt 324
Query: 325 aactttatgacaatcgtgttatttggtgctgttgggactttaatatcct 373
|||||||| || ||| || ||||||||||| |||| || ||||||||||
Sbjct: 325 aactttatcactatcatgctatttggtgctattggcacattaatatcct 373
>29726.m003982 sodium/hydrogen exchanger, putative
Length = 1626
Score = 87.7 bits (44), Expect = 7e-17
Identities = 62/68 (91%)
Strand = Plus / Plus
Query: 253 ttctttatatatgttcttccacctatcatttttaatgccgggttccaggttaaaaagaag 312
|||||||||||| ||||||||||||| ||||||||||| ||||||||||| || ||||||
Sbjct: 253 ttctttatatatcttcttccacctattatttttaatgcggggttccaggtgaagaagaag 312
Query: 313 cagttttt 320
|| |||||
Sbjct: 313 caattttt 320
>27613.m000616 sodium/hydrogen exchanger, putative
Length = 1563
Score = 56.0 bits (28), Expect = 2e-07
Identities = 67/80 (83%)
Strand = Plus / Plus
Query: 253 ttctttatatatgttcttccacctatcatttttaatgccgggttccaggttaaaaagaag 312
|||||||| ||| | ||||| ||||||||||| ||||| || || ||||| || || |||
Sbjct: 238 ttctttatttatctccttcctcctatcattttcaatgcgggatttcaggtcaagaaaaag 297
Query: 313 cagttttttagaaactttat 332
||||||||| |||||||||
Sbjct: 298 cagttttttcaaaactttat 317
>30128.m008729 sodium/hydrogen exchanger, putative
Length = 2130
Score = 54.0 bits (27), Expect = 1e-06
Identities = 60/71 (84%)
Strand = Plus / Plus
Query: 98 tttgtgcttgcattatcattggtcatcttcttgagaagaatcgatggatgaatgagtcaa 157
|||||||||| || ||||| ||||| |||||||| ||||||||||| ||||| || |
Sbjct: 602 tttgtgcttgtatcatcatcggtcaccttcttgaagagaatcgatgggctaatgaatcta 661
Query: 158 ttactgccctt 168
|||||||||||
Sbjct: 662 ttactgccctt 672