Jatropha Genome Database
- JcCA0153311.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0153311.10 + phase: 0
(942 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
27956.m000359 r2r3-myb transcription factor, putative 404 e-112
30125.m001257 r2r3-myb transcription factor, putative 174 6e-43
30147.m013885 r2r3-myb transcription factor, putative 103 2e-21
29680.m001686 r2r3-myb transcription factor, putative 72 7e-12
28154.m000040 r2r3-myb transcription factor, putative 70 3e-11
29889.m003258 r2r3-myb transcription factor, putative 60 3e-08
30076.m004682 r2r3-myb transcription factor, putative 58 1e-07
29005.m000265 r2r3-myb transcription factor, putative 58 1e-07
30005.m001298 Transcription repressor MYB4, putative 54 2e-06
29631.m001031 r2r3-myb transcription factor, putative 52 6e-06
>27956.m000359 r2r3-myb transcription factor, putative
Length = 990
Score = 404 bits (204), Expect = e-112
Identities = 327/368 (88%)
Strand = Plus / Plus
Query: 25 cagaaagttaagagaggcttatggtctcctgaagaagatgagaagcttattaaggtcata 84
|||||||| |||||||| |||||||||||||||||||||||||| || || ||| |||||
Sbjct: 25 cagaaagtcaagagagggttatggtctcctgaagaagatgagaaactaatcaagttcata 84
Query: 85 accactcatggtcatggttcttggagttctgttcccaagctagcaggtctgcaaaggtgt 144
|| || |||||||||||||||||||| ||||| || ||||| ||||| |||| ||||||
Sbjct: 85 actacccatggtcatggttcttggagctctgtccctaagcttgcagggttgcacaggtgt 144
Query: 145 ggaaagagttgcagactaagatggataaactacttgagaccagatctaaaaagaggttca 204
||||| ||||||||||| ||||||||||| ||| |||||||||||||||||||||| |||
Sbjct: 145 ggaaaaagttgcagactgagatggataaattacctgagaccagatctaaaaagagggtca 204
Query: 205 tttacagcacaagaagagaggaccatcattgatgttcatagaattctaggcaacaaatgg 264
||||| ||||||||||||||||| || |||||||||||||||| ||||||||| ||||
Sbjct: 205 tttactgcacaagaagagaggacaattgttgatgttcatagaatattaggcaacagatgg 264
Query: 265 gctcagatagctaaacatttacctggtagaactgacaatgaggtcaagaatttctggaac 324
||||| |||||||| |||||||||||||||||||| ||||| |||||||| || ||||||
Sbjct: 265 gctcaaatagctaagcatttacctggtagaactgataatgaagtcaagaacttttggaac 324
Query: 325 tcatgcatcaagaaaaagcttattgctcaagggttagatcccaacactcacaaactcctt 384
||||||||||| ||||||||||| || |||||||||||||||||||| ||||||||
Sbjct: 325 agttgcatcaagaagaagcttattgcacaggggttagatcccaacactcataaactcctg 384
Query: 385 tctcctaa 392
||||||||
Sbjct: 385 tctcctaa 392
Score = 63.9 bits (32), Expect = 2e-09
Identities = 41/44 (93%)
Strand = Plus / Plus
Query: 849 ctctaactttgattttgattttgtggagtctgcactaatgcctg 892
|||||||||||||||| |||||||||||||| || |||||||||
Sbjct: 876 ctctaactttgattttaattttgtggagtctacattaatgcctg 919
>30125.m001257 r2r3-myb transcription factor, putative
Length = 960
Score = 174 bits (88), Expect = 6e-43
Identities = 271/332 (81%)
Strand = Plus / Plus
Query: 13 tgttgtagcaaacagaaagttaagagaggcttatggtctcctgaagaagatgagaagctt 72
||||| |||||||||||||| || ||||| |||||||||||||||||||| |||||||||
Sbjct: 13 tgttgcagcaaacagaaagtgaaaagagggttatggtctcctgaagaagacgagaagctt 72
Query: 73 attaaggtcataaccactcatggtcatggttcttggagttctgttcccaagctagcaggt 132
||| || || || | || ||||| |||||||||||| || || || || ||
Sbjct: 73 ggcaagtatatcacaacctacggccatggaagttggagttctgtcccaaaacttgctggg 132
Query: 133 ctgcaaaggtgtggaaagagttgcagactaagatggataaactacttgagaccagatcta 192
||||| |||||||| || ||||| ||| | ||||||||||||||| ||||||||||||||
Sbjct: 133 ctgcagaggtgtggcaaaagttgtagattgagatggataaactacctgagaccagatcta 192
Query: 193 aaaagaggttcatttacagcacaagaagagaggaccatcattgatgttcatagaattcta 252
|| || ||| | || |||||||||||||| || || |||||||||||||||||| ||
Sbjct: 193 aagaggggtaccttctcagcacaagaagagcagattattattgatgttcatagaatttta 252
Query: 253 ggcaacaaatgggctcagatagctaaacatttacctggtagaactgacaatgaggtcaag 312
|| |||| |||||| || ||||| |||||| |||| || || || ||||| || || |||
Sbjct: 253 ggtaacagatgggcacaaatagcaaaacatctaccagggaggacagacaacgaagtgaag 312
Query: 313 aatttctggaactcatgcatcaagaaaaagct 344
||||| |||||||||||||| ||||| |||||
Sbjct: 313 aatttttggaactcatgcataaagaagaagct 344
>30147.m013885 r2r3-myb transcription factor, putative
Length = 1137
Score = 103 bits (52), Expect = 2e-21
Identities = 73/80 (91%)
Strand = Plus / Plus
Query: 106 tggagttctgttcccaagctagcaggtctgcaaaggtgtggaaagagttgcagactaaga 165
|||||||||||||| ||| |||| |||||||||||||||||||||||||||||| | |||
Sbjct: 109 tggagttctgttcctaagttagctggtctgcaaaggtgtggaaagagttgcagattgaga 168
Query: 166 tggataaactacttgagacc 185
||||| |||||||| |||||
Sbjct: 169 tggattaactacttaagacc 188
>29680.m001686 r2r3-myb transcription factor, putative
Length = 543
Score = 71.9 bits (36), Expect = 7e-12
Identities = 48/52 (92%)
Strand = Plus / Plus
Query: 138 aaggtgtggaaagagttgcagactaagatggataaactacttgagaccagat 189
||||||||||||||||||||| || ||||||||||||||| |||| ||||||
Sbjct: 141 aaggtgtggaaagagttgcaggcttagatggataaactacctgaggccagat 192
>28154.m000040 r2r3-myb transcription factor, putative
Length = 906
Score = 69.9 bits (35), Expect = 3e-11
Identities = 53/59 (89%)
Strand = Plus / Plus
Query: 142 tgtggaaagagttgcagactaagatggataaactacttgagaccagatctaaaaagagg 200
||||| |||||||||||||| ||||||||||| |||||||| || ||||| ||||||||
Sbjct: 145 tgtggcaagagttgcagactcagatggataaattacttgaggcctgatcttaaaagagg 203
>29889.m003258 r2r3-myb transcription factor, putative
Length = 996
Score = 60.0 bits (30), Expect = 3e-08
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 138 aaggtgtggaaagagttgcagactaagatggataaactactt 179
||||||||| |||||||||||||| |||||||| ||||||||
Sbjct: 141 aaggtgtggcaagagttgcagactgagatggattaactactt 182
>30076.m004682 r2r3-myb transcription factor, putative
Length = 282
Score = 58.0 bits (29), Expect = 1e-07
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 139 aggtgtggaaagagttgcagactaagatggataaactacttgaga 183
|||||||| || ||||||||||| |||||||||||||| ||||||
Sbjct: 142 aggtgtgggaaaagttgcagactgagatggataaactatttgaga 186
>29005.m000265 r2r3-myb transcription factor, putative
Length = 297
Score = 58.0 bits (29), Expect = 1e-07
Identities = 65/77 (84%)
Strand = Plus / Plus
Query: 113 ctgttcccaagctagcaggtctgcaaaggtgtggaaagagttgcagactaagatggataa 172
||||||| ||||| ||||| || ||||||||||||||||||||| || ||||||| ||
Sbjct: 116 ctgttcctaagcttgcaggattgttaaggtgtggaaagagttgcaggctgagatggacaa 175
Query: 173 actacttgagaccagat 189
|||| || || ||||||
Sbjct: 176 actatttaaggccagat 192
>30005.m001298 Transcription repressor MYB4, putative
Length = 909
Score = 54.0 bits (27), Expect = 2e-06
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 139 aggtgtggaaagagttgcagactaagatggataaactacttgagacc 185
|||||||||||||| |||||||| ||||||| ||| ||| |||||||
Sbjct: 142 aggtgtggaaagagctgcagactgagatggacaaattacctgagacc 188
>29631.m001031 r2r3-myb transcription factor, putative
Length = 267
Score = 52.0 bits (26), Expect = 6e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 139 aggtgtggaaagagttgcagactaagatgg 168
|||||||||||||| |||||||||||||||
Sbjct: 127 aggtgtggaaagagctgcagactaagatgg 156