Jatropha Genome Database
- JcCA0153141.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0153141.10 + phase: 0
(1395 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30190.m011160 myb, putative 357 1e-97
>30190.m011160 myb, putative
Length = 1494
Score = 357 bits (180), Expect = 1e-97
Identities = 500/606 (82%), Gaps = 3/606 (0%)
Strand = Plus / Plus
Query: 55 caagttatagatgctcaacctttctcagtctattttggtacttgtcgtacagctattcca 114
||||| ||||||||| ||||| ||| || |||||||| | |||| | ||||| | |||
Sbjct: 34 caagtcatagatgctttaccttactctgtttattttggcaattgtgatgcagctttgcca 93
Query: 115 aggagggtaactggtccagctcgacaatcaacaaaagggcattggacagaagcagaggat 174
| |||| | |||| || |||||||||||||| ||||||| ||||| ||| ||||||
Sbjct: 94 cgaagggaagctggaccggctcgacaatcaactaaagggcgctggactgaatatgaggat 153
Query: 175 tatcttcttatggaatcagtcagagagttccatgggaggaattggaagaaaatagctgag 234
|||||||||| ||| |||| | | | ||| ||| ||||||||||| ||||||||||||
Sbjct: 154 tatcttcttacagaagcagttacaaaattcaatgcgaggaattggaggaaaatagctgaa 213
Query: 235 tgtctccctggaaggactgtttctcagtgctttactcgctggaatagagttcttaatcca 294
| || ||| || ||| ||| |||||||||||||||||||| || |||||||||||
Sbjct: 214 agccttcctcaaaagacaacttcacagtgctttactcgctggaagagggttcttaatcct 273
Query: 295 gcagttgtcaaaggagcatggacaaaagaggaggatgactgcatcatagagtcggttaga 354
||| ||||||||||| | |||||||| ||||||||||| || || |||||||| || |||
Sbjct: 274 gcaattgtcaaaggaacgtggacaaaggaggaggatgagtgtattatagagtcagtcaga 333
Query: 355 aagtatggtccgaagaaatggtctgttattgccaagttcttgccaggtcgcttaggcagg 414
||||| ||||| ||||||||||||| |||| |||| |||||||||||||||||||| |
Sbjct: 334 aagtacggtcctcggaaatggtctgttgttgcaaagtccttgccaggtcgcttaggcaag 393
Query: 415 caatgcagagaaaggtggtacaatcacttagacccagctataaggagaacttcatggaca 474
||||| ||||||||||||| |||||||||||||||||||||||| | |||||||||||||
Sbjct: 394 caatgtagagaaaggtggttcaatcacttagacccagctataagcaaaacttcatggaca 453
Query: 475 gaggaggaggaattgactcttattcactaccatgaaacatatgggaacaagtggacagag 534
|| || ||||| ||| |||||||||| ||||||||| |||||| ||||| ||| | |||
Sbjct: 454 gaagacgaggagttggctcttattcattaccatgaattatatggaaacaaatgggctgag 513
Query: 535 atagcaaagtttctacgtggaaggactgacaatgcaataaaaaatcattggaattgtata 594
|| |||| |||| | | ||| ||| |||| |||||||| |||||||| |||||||| ||
Sbjct: 514 attgcaaggtttttgcctgggagggctgaaaatgcaattaaaaatcactggaattgctta 573
Query: 595 atgaagaagaagttaaattcaaatt---cccctgcttgtgcaatggattcatgcacagat 651
|||||||||||||| |||||| || ||| ||||| |||||||||| ||||||| |
Sbjct: 574 atgaagaagaagtttgattcaattttaccccatgcttatgcaatggatcgatgcacatct 633
Query: 652 ggttct 657
||||||
Sbjct: 634 ggttct 639
Score = 89.7 bits (45), Expect = 4e-17
Identities = 72/81 (88%)
Strand = Plus / Plus
Query: 1117 gaatcaatattgaggaattcagcaaggacttttaaaaatacaccttctattataagaaaa 1176
|||||||||||||||| ||| |||||||| ||||||||||| ||||| || |||||||||
Sbjct: 1204 gaatcaatattgaggagttcggcaaggacctttaaaaataccccttccatcataagaaaa 1263
Query: 1177 agaacttacaggaagactggt 1197
|| ||||||| |||||||||
Sbjct: 1264 cgagcttacagaaagactggt 1284