Jatropha Genome Database
- JcCA0153071.30
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0153071.30 + phase: 0
(723 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30138.m004048 RING-H2 finger protein ATL1Q, putative 605 e-172
>30138.m004048 RING-H2 finger protein ATL1Q, putative
Length = 645
Score = 605 bits (305), Expect = e-172
Identities = 548/629 (87%)
Strand = Plus / Plus
Query: 95 aatttgaagggagtcggattctcgattgcattcccagattcgtcgccggtgccatttctg 154
|||||||||| |||||| |||| |||| |||| | ||| || || |||||||| ||||
Sbjct: 17 aatttgaaggaagtcggtttcttgattatgttcctaaattggttgctggtgccatctctg 76
Query: 155 gagctctcacggggattttcgctctggctggagcttttacaggagctgttactggtgctt 214
| |||||||| || |||| ||||| ||||||||||||||||||||| || |||||||||
Sbjct: 77 gtgctctcacaggattttttgctcttgctggagcttttacaggagctattgctggtgctt 136
Query: 215 tagctggccgggcttctgattgtggtgttcttcgcggggctggactgggggctattgctg 274
|||||||||| |||||| ||||||||||| |||| ||||||||||| |||||||||||||
Sbjct: 137 tagctggccgagcttctaattgtggtgtttttcgaggggctggactaggggctattgctg 196
Query: 275 gtgctgtgctttctgttgaggttttggaggcttctcgtgcttattggtgtttggaacaat 334
||||||| ||||||||||||||||||||||||||||| ||||| |||||||||||||| |
Sbjct: 197 gtgctgtcctttctgttgaggttttggaggcttctcgggcttactggtgtttggaacagt 256
Query: 335 ctggttcacgaggcccttcatcgatggcagattttgtagaagagcttctccaggggaggt 394
||||||| |||||||||||||| |||||||||||| | ||||||||||| | ||||||||
Sbjct: 257 ctggttcgcgaggcccttcatctatggcagattttatggaagagcttctgcgggggaggt 316
Query: 395 tggtagatgaacagttttcgcctgcaatgctaactgcttatcattggcaggtaagcatcg 454
| | ||||||||||||||| || ||| |||||||| |||||||||||||||||||||| |
Sbjct: 317 ttgcagatgaacagttttcaccagcagtgctaactacttatcattggcaggtaagcattg 376
Query: 455 caaatataagctatgatgagatttatgatgttcatagtgaagttgcatctagagggttgt 514
| ||| |||| |||||||||||| |||||||| || |||||| |||||| | ||||||||
Sbjct: 377 ctaatttaagttatgatgagattcatgatgttaatggtgaagctgcatccaaagggttgt 436
Query: 515 caagcgactcactgaagaaattgccatgtcataccttggatgaagtaaaggcaaaacaga 574
|| | || | || ||||| |||||| ||||||||||||||||| | |||||||||||||
Sbjct: 437 caggagatttgctcaagaagttgccaagtcataccttggatgaaatcaaggcaaaacaga 496
Query: 575 ccatctgctgtactatatgcttgcaggatattgaaaaaggggaaattgcaaggactttgc 634
||||||| ||||| ||||||||||||||||| | |||||||| |||||||||| |||||
Sbjct: 497 ccatctgttgtacaatatgcttgcaggatatcgttaaaggggagattgcaaggagtttgc 556
Query: 635 ctcgctgccgccatactttccacttggcctgtgtggacagatggctcataagacatggat 694
| || ||| |||| || |||||||| |||||||| |||| ||||| ||||||||||| |
Sbjct: 557 cccgttgctgccacacattccacttagcctgtgttgacaagtggctaataagacatggct 616
Query: 695 catgccccatatgcaggcaggatgtgtag 723
||||||| ||||||||||||||||||||
Sbjct: 617 catgccctgtatgcaggcaggatgtgtag 645