Jatropha Genome Database
- JcCA0152881.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0152881.10 + phase: 2 /partial
(1084 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29822.m003360 Cyclic nucleotide-gated ion channel, putative 860 0.0
30147.m013975 Cyclic nucleotide-gated ion channel, putative 151 1e-35
28863.m000090 Cyclic nucleotide-gated ion channel, putative 62 7e-09
29848.m004476 Cyclic nucleotide-gated ion channel, putative 60 3e-08
30078.m002325 conserved hypothetical protein 56 5e-07
>29822.m003360 Cyclic nucleotide-gated ion channel, putative
Length = 1965
Score = 860 bits (434), Expect = 0.0
Identities = 755/862 (87%)
Strand = Plus / Plus
Query: 1 ctcatatgcacagactttggagaccaccacatttcttggtgagaatctcttctgcattat 60
|||||| ||||||||| ||||||| | ||||||||| ||||||||| |||||||||| |
Sbjct: 849 ctcatacgcacagactctggagacaagcacatttctgggtgagaatatcttctgcatcgt 908
Query: 61 tacatgcattctcggtttagttctctccgcacagttgattggcaacatgcagactaattt 120
|| |||||| | ||||| ||||| ||||||||| ||||||| |||||||||||||||||
Sbjct: 909 cacttgcattattggtttggttctttccgcacagctgattggtaacatgcagactaattt 968
Query: 121 gcaatctatgacggtaagagtggaagaatggaggattaagcgaagagatacagaagagtg 180
||||||||||||||||||||| ||||| |||||||| ||||||||||||||||| |||||
Sbjct: 969 gcaatctatgacggtaagagttgaagagtggaggatcaagcgaagagatacagaggagtg 1028
Query: 181 gatgaggcatcgccaattacctccagatttgcaggatcgagttcgacgttttgttcagta 240
|||||||||||||||||||||||| || |||||||| || ||||| || |||||||||||
Sbjct: 1029 gatgaggcatcgccaattacctcctgacttgcaggagcgcgttcgccgatttgttcagta 1088
Query: 241 caaatggcttgctacaagaggagttcatgaagaatccattgtgaagtccctgccattgga 300
||| ||||||||||||||||||||||| |||||||| || || || |||||||||||
Sbjct: 1089 caagtggcttgctacaagaggagttcacgaagaatctatattgcgctcactgccattgga 1148
Query: 301 ccttcgacgagaaattcagcgacatttatgtctggccttagttcgccgcgtcccattctt 360
|||| |||||||||| ||||||||||||||||||||| | |||||||| |||||||||||
Sbjct: 1149 ccttagacgagaaatccagcgacatttatgtctggcccttgttcgccgtgtcccattctt 1208
Query: 361 ttcacaaatggatgaccagctacttgatgccatatgcgaacgcctcgtctcttctttgag 420
||||||||||||||||||||||| ||||| |||||||| |||||||| || ||||||||
Sbjct: 1209 ctcacaaatggatgaccagctactggatgctatatgcgagcgcctcgtttcctctttgag 1268
Query: 421 tactcagggaaactatatagttcgagagggtgatccagtaaatgagatgctatttataat 480
||| |||||| ||||||| || |||||||||||| |||||||||||| | ||||||||
Sbjct: 1269 cactgagggaacctatatattttcagagggtgatcctgtaaatgagatgttgtttataat 1328
Query: 481 cagaggacaattagaaagctcaacaactaatggagggaggaccggattcttcaactccat 540
|||||| |||||| |||||||| ||||| ||||| ||| | |||||||||||||||||
Sbjct: 1329 tagaggaacattagagagctcaacgactaacggaggaaggtctggattcttcaactccat 1388
Query: 541 cacccttagacccggtgatttctgcggcgaggaattacttacatgggctcttatgcccaa 600
|||||||||||| ||||| |||||||| ||||||||||| || ||||| | ||||||||
Sbjct: 1389 cacccttagacctggtgacttctgcggtgaggaattactgacgtgggcattaatgcccaa 1448
Query: 601 ttctactgcaagcttgccttcttcaactcggactgtaaaagcactttctgaagttgaagc 660
||||| ||| | ||||| |||||||| | ||||| ||||| || ||||||||||| ||
Sbjct: 1449 ttctagtgcgcacctgcctgcttcaactagaactgtcaaagctctctctgaagttgaggc 1508
Query: 661 tttctcacttcaagctgacgaccttacatttttcgcgaaacaatttaagagacttcaaag 720
|||| | ||||||||||| ||||| | |||| |||| | ||||||||||||||||||||
Sbjct: 1509 tttcgcccttcaagctgaagacctcatatttgtcgcacagcaatttaagagacttcaaag 1568
Query: 721 caagaagctacaacatgcctttaggtactattctcaccaatggagaacatgggctgcttg 780
||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 1569 caagaagctgcaacatgcctttaggtactattctcaccaatggagaacatggggtgctat 1628
Query: 781 cttgatacaagctgtttggagaagatatcagaaaagaaagctggcaaaggagttggcatc 840
||||||||| | ||||||||||||||||||||||||||| |||||| |||| |||| ||
Sbjct: 1629 tttgatacaatcagtttggagaagatatcagaaaagaaagatggcaagggagctggcttc 1688
Query: 841 gcgagagagtctttcttacatt 862
||||||| ||||||||||||
Sbjct: 1689 aagagagagcctttcttacatt 1710
Score = 81.8 bits (41), Expect = 8e-15
Identities = 50/53 (94%)
Strand = Plus / Plus
Query: 929 aatgcccagcagcttggagctacaatcttggcttcaaaatttgctgcaaatac 981
||||| ||||| |||||||| ||||||||||||||||||||||||||||||||
Sbjct: 1807 aatgcacagcatcttggagcaacaatcttggcttcaaaatttgctgcaaatac 1859
>30147.m013975 Cyclic nucleotide-gated ion channel, putative
Length = 2043
Score = 151 bits (76), Expect = 1e-35
Identities = 390/492 (79%), Gaps = 2/492 (0%)
Strand = Plus / Plus
Query: 98 attggcaacatgcagactaatttgcaatctatgacggtaagagtggaagaatggaggatt 157
||||||||||||||||| || ||||||| | ||||| ||| | |||||||||||||||
Sbjct: 1060 attggcaacatgcagacatatatgcaatccacgacggctagattagaagaatggaggatt 1119
Query: 158 aagcgaagagatacagaagagtggatgaggcatcgccaattacctccagatttgcaggat 217
|||| ||||||||| ||||||||||||||||| |||||||||||||| |||| ||
Sbjct: 1120 cgacgaaaagatacagaggagtggatgaggcatcgtcaattacctccagaactgcaagaa 1179
Query: 218 cgagttcgacgttttgttcagtacaaatggcttgctacaagaggagttcatgaagaatcc 277
|| ||||| ||||| ||||||||||||||||| || |||||||| || ||||||||||
Sbjct: 1180 cgtgttcgtcgtttcgttcagtacaaatggctggcaacaagaggtgtggatgaagaatct 1239
Query: 278 attgtgaagtccctgccattggaccttcgacgagaaattcagcgacatttatgtctggcc 337
|| |||| | | || || ||||| |||||| |||||| | ||| | ||| | ||
Sbjct: 1240 atcctgaaagctttacctttagacctgcgacgacgaattcaaaggcatctttgtttagct 1299
Query: 338 ttagttcgccgcgtcccattcttttcacaaatggatgaccagctacttgatgccatatgc 397
| ||| | || ||||| |||||| ||||||||||||| || |||||||||| ||||||
Sbjct: 1300 cttgttagacgggtccctttctttgcacaaatggatgatcaattacttgatgcaatatgc 1359
Query: 398 gaacgcctcgtctcttctttgagtactcagggaaac-tatatagttcgagagggtgatcc 456
||||| || || || || |||| ||| || || || || || || | || || |||||
Sbjct: 1360 gaacgtctggtttcatcattgaacact-agagacacatacattgtgagggaaggagatcc 1418
Query: 457 agtaaatgagatgctatttataatcagaggacaattagaaagctcaacaactaatggagg 516
||| ||||||||||| || || ||||||||| | |||| ||||| ||||| ||||| ||
Sbjct: 1419 agtgaatgagatgcttttcatcatcagaggaaatctagagagctctacaacaaatggtgg 1478
Query: 517 gaggaccggattcttcaactccatcacccttagacccggtgatttctgcggcgaggaatt 576
||| | || || |||||||| || || || ||| | ||||||||||||||||| |||||
Sbjct: 1479 aaggtcaggttttttcaactctattacgctgagagcaggtgatttctgcggcgaagaatt 1538
Query: 577 acttacatgggc 588
| | ||||||||
Sbjct: 1539 attgacatgggc 1550
>28863.m000090 Cyclic nucleotide-gated ion channel, putative
Length = 969
Score = 61.9 bits (31), Expect = 7e-09
Identities = 46/51 (90%)
Strand = Plus / Plus
Query: 146 gaatggaggattaagcgaagagatacagaagagtggatgaggcatcgccaa 196
|||||||| |||||||||||||||| || ||||||||||| |||||||||
Sbjct: 43 gaatggagacttaagcgaagagataccgaggagtggatgagacatcgccaa 93
>29848.m004476 Cyclic nucleotide-gated ion channel, putative
Length = 1890
Score = 60.0 bits (30), Expect = 3e-08
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 362 tcacaaatggatgaccagctacttgatgccatatgcga 399
||||| |||||||| |||||||||||||||||||||||
Sbjct: 1177 tcacagatggatgatcagctacttgatgccatatgcga 1214
Score = 56.0 bits (28), Expect = 5e-07
Identities = 124/156 (79%)
Strand = Plus / Plus
Query: 119 ttgcaatctatgacggtaagagtggaagaatggaggattaagcgaagagatacagaagag 178
||||||||||| || || ||| | ||||| |||||| | ||||| |||| || || |||
Sbjct: 934 ttgcaatctataacagtcagacttgaagagtggaggctcaagcggcgagacactgaggag 993
Query: 179 tggatgaggcatcgccaattacctccagatttgcaggatcgagttcgacgttttgttcag 238
|||||||| ||||||||| | |||| | || ||| || |||||| | || ||||||||
Sbjct: 994 tggatgagacatcgccaactccctcaaaatctgcgagaacgagttaggcgatttgttcaa 1053
Query: 239 tacaaatggcttgctacaagaggagttcatgaagaa 274
||||| |||||||| || |||| ||| ||||||||
Sbjct: 1054 tacaagtggcttgcaactcgaggggttgatgaagaa 1089
>30078.m002325 conserved hypothetical protein
Length = 636
Score = 56.0 bits (28), Expect = 5e-07
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 761 tggagaacatgggctgcttgcttgatacaagc 792
||||||||||||||||||||||| ||||||||
Sbjct: 403 tggagaacatgggctgcttgctttatacaagc 434