Jatropha Genome Database

JcCA0152741.20
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0152741.20 + phase: 0 
         (534 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30170.m013804 cinnamoyl-CoA reductase, putative                       184   4e-46

>30170.m013804 cinnamoyl-CoA reductase, putative
          Length = 963

 Score =  184 bits (93), Expect = 4e-46
 Identities = 219/261 (83%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgtcaaacaaagaacaagtatgtgtaacaggtgcaggagggtacttggcatcatggttg 60
           |||||| || ||||| |||| ||||| ||||||||||||||||||||||  || ||||| 
Sbjct: 1   atgtcagaccaagaaaaagtctgtgtgacaggtgcaggagggtacttgggttcgtggtta 60

                                                                       
Query: 61  gtgaagcttctcctctcaaagggttacatcgtgcatggaacagtgagagatccaagtgat 120
           ||||||||||| || || ||||||||  | || |||||||| |||||||| ||| | |||
Sbjct: 61  gtgaagcttcttctttctaagggttatgtggtccatggaactgtgagagacccatgcgat 120

                                                                       
Query: 121 aacaagaatgcacatctaaagaaattggataacgctactgagaatctgaaactcttcaag 180
            ||||||| |||||||| ||| ||||||| |||||| | | |||||||||||||||||||
Sbjct: 121 gacaagaacgcacatctgaagcaattggaaaacgctgcagtgaatctgaaactcttcaag 180

                                                                       
Query: 181 gcagacttgttggaatatgaaggtctttgtactgccattgaaggatgcattggagttttc 240
           || || |||||| | |||||| |||||| | |||| |||  ||||||||  || ||||||
Sbjct: 181 gctgatttgttgaactatgaaagtctttctcctgctattcgaggatgcaccggggttttc 240

                                
Query: 241 catgttgctagcccgcttcca 261
           |||||||||||||| ||||||
Sbjct: 241 catgttgctagcccacttcca 261



 Score =  167 bits (84), Expect = 8e-41
 Identities = 162/188 (86%)
 Strand = Plus / Plus

                                                                       
Query: 311 aggaacaacttatggaacccgctgtcactggcacgcgaaatgtgctcaatgcatgctcaa 370
           ||||| |||| |||||||| ||||||||||| |||| ||||||  |  ||||  ||||||
Sbjct: 284 aggaagaactaatggaacctgctgtcactggtacgcaaaatgttttggatgcgagctcaa 343

                                                                       
Query: 371 aggctaaagtgaagaaagttattgtcgtgtcctctgttgctgctgttgcactaaacccaa 430
           ||||||||||||||||||| ||||| ||||||||  |||||||  |||  ||||| ||||
Sbjct: 344 aggctaaagtgaagaaagtaattgttgtgtcctcacttgctgccattgtgctaaatccaa 403

                                                                       
Query: 431 attggcccaaggagcaaatcatggatgaggagtgctggtctgacttggaattttgtgagg 490
            |||||| ||||| ||| |||||||||||||||| ||||||||||||||||| |||||||
Sbjct: 404 gttggccaaaggaccaagtcatggatgaggagtgttggtctgacttggaattctgtgagg 463

                   
Query: 491 caattaag 498
           ||||||||
Sbjct: 464 caattaag 471