Jatropha Genome Database
- JcCA0152731.30
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0152731.30 - phase: 1 /pseudo/partial
(1481 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29742.m001386 laccase, putative 985 0.0
30131.m007048 laccase, putative 56 6e-07
29751.m001786 laccase, putative 52 1e-05
>29742.m001386 laccase, putative
Length = 1719
Score = 985 bits (497), Expect = 0.0
Identities = 1129/1338 (84%), Gaps = 15/1338 (1%)
Strand = Plus / Plus
Query: 109 ttcacgtacgagtttacgttggtgaagcaaaagggcacatttttatggcatgctcacgtt 168
||||| ||||||||||| || ||||||||||||||||| || || ||||||||||| |||
Sbjct: 355 ttcacttacgagtttacattagtgaagcaaaagggcactttcttttggcatgctcatgtt 414
Query: 169 tcttggcttagaggcaccgtttatggtgctattgttgtatatcctaagactggcgtccca 228
|||||||||||||| || || |||||||||||||||||| |||| |||||||| || |||
Sbjct: 415 tcttggcttagaggaactgtctatggtgctattgttgtacatccaaagactggggtgcca 474
Query: 229 tatccatttcctttcccccacgaagagcatatagtaattcttggggagtattggctccaa 288
|| |||||||||||||| ||||||||||| || | ||||||||||||||||||||||
Sbjct: 475 tacccatttcctttcccttacgaagagcatgtaattcttcttggggagtattggctccag 534
Query: 289 gatattgtacagctggagaggcaagtgctagcaagcggaggacctccaccaccgtcaaat 348
||| | | || || ||||||||| ||||||||||||||||| |||| || || ||||||
Sbjct: 535 gatgtaatgcaacttgagaggcaaatgctagcaagcggaggagctcctcctccttcaaat 594
Query: 349 gcctataccatcaatggccatcctggtcctaattacaattgctctgctaatgttattgtt 408
||||||||||||||||| | ||||| ||||| ||||||||||||||||| |
Sbjct: 595 gcctataccatcaatggtcgccctggccctaactacaattgctctgctaacg-------- 646
Query: 409 tcagatgtatataagatcgacgtggtccctgggaagacctatttgttacggctgattaac 468
||||||||||||| |||||||||||||| ||||||||| ||||| || |||| |||
Sbjct: 647 ----atgtatataagattgacgtggtccctggaaagacctatatgttaaggttgataaac 702
Query: 469 gcaggtttaaacatggaaaactttttcgcaattgctaatcacaaattaacaatagtagaa 528
||||| |||||||||||||| || || |||||||||||||||| ||||||| ||||||||
Sbjct: 703 gcaggcttaaacatggaaaatttctttgcaattgctaatcacagattaacagtagtagaa 762
Query: 529 gctgatgctgagtacactaaaccattcactactgaccgtgtaatgcttggaccgggacag 588
|| |||||||||||||| |||||||| || || |||||| ||||||||||||||||||
Sbjct: 763 gccgatgctgagtacacaaaaccatttaccaccagccgtgttatgcttggaccgggacag 822
Query: 589 acgatgaatgtcctcgtcactgctgatcagcccatcggaaa-tactcaatggctatggga 647
|||||||| |||||||||||||| |||||||| || ||||| ||||| ||||| ||||||
Sbjct: 823 acgatgaacgtcctcgtcactgccgatcagccaataggaaaatactccatggccatggga 882
Query: 648 ccttacatgtcagctcagggggtcgcattccagaacatatcatcaattgcttatctccaa 707
||||| |||||||||||||| || | ||||| ||||||||||| ||||| || |||||
Sbjct: 883 ccttatatgtcagctcagggtgtttcgttccaaaacatatcatcgattgcctacttccaa 942
Query: 708 tacttgggtgcaaccccaaatagcctttcattacctgctagattaccaaactttaatgat 767
|| ||||||| ||||| |||||| | || || || || |||||||| | |||||||||
Sbjct: 943 tatgtgggtgctacccctaatagcatatcgtttccagccagattacccatttttaatgat 1002
Query: 768 aatttagctgttaagactgtgatggatggtctaagaggtttaaatacttcaaatgttcca 827
||||||||||||||||| | |||||||| || | ||| ||||||||||| |||||||||
Sbjct: 1003 aatttagctgttaagacaatcatggatggactgaaaggcttaaatacttcgaatgttcca 1062
Query: 828 aaagagattgattccaatctctttgtaaccattggaataaatgttaataggtgtcgctct 887
|| ||| |||| || || ||||| ||||||||| |||||||||||| ||| | ||
Sbjct: 1063 aaggaggttgacaggaacctgtttgtcaccattggattaaatgttaataagtgcaggtcc 1122
Query: 888 aaaacaccacgaaacaattgtcaagg-cgtaaataatgggaccatggcagcttcaatgaa 946
|| | ||||| | || || || || ||||| |||||| ||||||||||||||||||||
Sbjct: 1123 aagaaaccacaacgaaactgccagggtcgtaa-taatggtaccatggcagcttcaatgaa 1181
Query: 947 caatatgagtttcgtcaagcctactgtttcaattttggaagcctattacaagggaaccga 1006
|||||| ||||| | ||||| || |||||| |||||||||| ||||| ||||||| |
Sbjct: 1182 caatataagttttattaagccaacagtttcagttttggaagcttattataagggaattaa 1241
Query: 1007 gggctttttcactgatgacttccctgaggcaccacttagattctatgatttcgtcaatgg 1066
||| ||||||||| ||||| |||| ||||| |||||||||||||| || ||||||||
Sbjct: 1242 gggtcatttcactgacgactttcctggagcacctcttagattctatgactttgtcaatgg 1301
Query: 1067 ggcaccaaataatgccccagttgatacaaactcaatgaatgggactaggactaaggtcct 1126
|||||| || ||||||||| ||| ||||||||||||| |||||||||||||||||| ||
Sbjct: 1302 ggcacctaacaatgccccaaatgacacaaactcaatgactgggactaggactaaggttct 1361
Query: 1127 tgaatacggaactagggttcaaatcattttgcaggacaccggaacgatcacaacagaaaa 1186
||| | ||||| |||||||| ||||| ||||| ||||| |||||| ||||||| || ||
Sbjct: 1362 tgagtttggaaccagggttcagatcatcttgcaagacactggaacggtcacaactgagaa 1421
Query: 1187 ccacccaattcacctccacggctatagcttctatgtagtcggctatggcactggaaacta 1246
||||||||||||||||| ||||||||||||||||| || || |||||||| || |||||
Sbjct: 1422 tcacccaattcacctccatggctatagcttctatgttgtgggttatggcaccggtaacta 1481
Query: 1247 taatccacaaagagcaaatttgaatttagtggatccgccatatatgaacaccattggagt 1306
||| || |||| ||||||||| ||| | || ||||| |||||||||||||| ||||||||
Sbjct: 1482 taacccgcaaacagcaaatttcaatctggttgatccaccatatatgaacacaattggagt 1541
Query: 1307 tccagttgggggatgggcagcaattcgttttgtggctgataatccaggggtttggtttat 1366
||||||||||||||||||||||||||| || || || || ||||||||||||||||||||
Sbjct: 1542 tccagttgggggatgggcagcaattcgcttcgtcgccgacaatccaggggtttggtttat 1601
Query: 1367 gcattgtcattttgatgtacatcaatcgtggggattagctacggtgcttatagtgaaaaa 1426
||||||||| || |||||||| || |||||||| |||| || |||||||||||||| ||
Sbjct: 1602 gcattgtcacttcgatgtacaccagtcgtgggggttaggaacagtgcttatagtgaagaa 1661
Query: 1427 tgggaaaggacatttgga 1444
||| ||| |||| |||||
Sbjct: 1662 tggtaaaagacacttgga 1679
Score = 83.8 bits (42), Expect = 3e-15
Identities = 75/86 (87%)
Strand = Plus / Plus
Query: 20 ccagggccggttgtttatgctcaagaaggcgatcgaattatcgtcaaagtcaccaacgaa 79
|||||||| ||||||||||| |||||||| || ||||| || |||||||| ||||||||
Sbjct: 187 ccagggccagttgtttatgcccaagaaggtgaccgaataatagtcaaagttaccaacgag 246
Query: 80 tccccttacaatgccaccatacactg 105
|| ||||||||||| ||||| |||||
Sbjct: 247 tcaccttacaatgctaccatccactg 272
>30131.m007048 laccase, putative
Length = 1677
Score = 56.0 bits (28), Expect = 6e-07
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 1344 gataatccaggggtttggtttatgcattgtca 1375
|||||||||||||| |||||||||||||||||
Sbjct: 1537 gataatccaggggtgtggtttatgcattgtca 1568
>29751.m001786 laccase, putative
Length = 1671
Score = 52.0 bits (26), Expect = 1e-05
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 1341 gctgataatccaggggtttggtttatgcattgtcattt 1378
||||||||||||||||| ||||| |||||||| |||||
Sbjct: 1528 gctgataatccaggggtgtggttcatgcattgccattt 1565