Jatropha Genome Database
- JcCA0152411.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0152411.10 - phase: 0 /partial
(2875 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30076.m004677 DNA replication regulator dpb11, putative 617 e-175
>30076.m004677 DNA replication regulator dpb11, putative
Length = 3210
Score = 617 bits (311), Expect = e-175
Identities = 542/619 (87%)
Strand = Plus / Plus
Query: 15 ttctccctccaaaacgtttctgggtgtccgtttcgttctctttggttttgattccatcca 74
|||||| ||||| |||||||| || |||||||| |||||||||||||| ||| | ||| |
Sbjct: 12 ttctccttccaagacgtttcttggcgtccgttttgttctctttggtttcgatccaatcaa 71
Query: 75 cgaacgccaggttcgagccaagctccttaatggcggtggagtggatgctggtcaatacag 134
| |||||||||| |||| |||||| || ||||||||||||| ||||||||||| ||||
Sbjct: 72 cctacgccaggttagagcaaagctcattgatggcggtggagttgatgctggtcagtacaa 131
Query: 135 ccaaagttgttcccacctgattgtggataaaattgtttatgatgatcctctatgtgttgc 194
||| |||| | || | ||||||||||||||||||||| ||||||| ||||| ||||
Sbjct: 132 tgaaaattgtactcatgtaattgtggataaaattgtttataatgatccaatatgtattgc 191
Query: 195 agcaagaaatgatgggaagactctggtcacagcactatgggttgaccatagttgtgatat 254
|||||||||||| ||||||| || ||||||| | |||||||||||||||||| ||||||
Sbjct: 192 tgcaagaaatgatcggaagacacttgtcacaggattatgggttgaccatagttatgatat 251
Query: 255 tggaatggcagtcgatgctacttcaattatgtatagacctcctagagatttgaatggaat 314
||| ||| || ||||||||||| |||||||||||||||| ||| |||||||| |||||
Sbjct: 252 tggcctggtggttgatgctacttctattatgtatagacctcttagggatttgaacggaat 311
Query: 315 tccgggtgccaaacatttaattatgtgcttaactggataccagagacaagatcgagatga 374
||| ||||| ||| |||||||||||| |||||||||||||| |||||||||||||||||
Sbjct: 312 tccaggtgctaaaagtttaattatgtgtttaactggataccaaagacaagatcgagatga 371
Query: 375 cattatgaccatggttagcctgatgggtgcacagttttctaagccattggtagcaaacaa 434
||||||||| ||||||||| ||||||| ||||| |||||||||||||| || ||||||||
Sbjct: 372 cattatgactatggttagcttgatgggggcacaattttctaagccattagtggcaaacaa 431
Query: 435 ggttactcatctcatatgctataaatttgaaggtgagaagtatgagcttgccagtaaact 494
||||||||||| |||||||||||||||||||||||||||||||||||||||| ||| |
Sbjct: 432 agttactcatcttatatgctataaatttgaaggtgagaagtatgagcttgccaataagtt 491
Query: 495 gaagaaaataaagcttgtcaaccatcgttggttagaggactgcttaagggattgggagct 554
||||||||||||||||| |||||||| ||||| || || || |||||||||||||| ||
Sbjct: 492 aaagaaaataaagcttgtaaaccatcgctggttggaagattgtttaagggattgggaact 551
Query: 555 tcttccagaagataattataacaagagtgggtacgagatggagatgatggaagctgaagc 614
|||||||||||||||||||| ||||||||| || ||| ||||||||||||| ||||||||
Sbjct: 552 tcttccagaagataattatagcaagagtggctatgagttggagatgatggaggctgaagc 611
Query: 615 aaaggattctgaggaggat 633
||| |||||||||||||||
Sbjct: 612 aaaagattctgaggaggat 630
Score = 246 bits (124), Expect = 6e-64
Identities = 202/228 (88%)
Strand = Plus / Plus
Query: 2648 tgaaaactgaacctgtatggtttatactgagcggacataagttacagaggaaagaatttc 2707
||||||||||||| |||||||||||| |||| ||||||| ||||||||| || || ||||
Sbjct: 2666 tgaaaactgaaccagtatggtttatattgagtggacataggttacagagaaaggagtttc 2725
Query: 2708 agcaagttattaggcgattgaaaggaaaagtctgcagagattcccatcagtggtcatacc 2767
|||||||||||||||| |||||||||||| | ||||||||||| ||||||||||| ||||
Sbjct: 2726 agcaagttattaggcgcttgaaaggaaaattttgcagagattctcatcagtggtcgtacc 2785
Query: 2768 aagcaacacacttcataacgccagatccaattcgtaggactgagaagttttttgctgctg 2827
| |||||||| |||||| | || |||||||||||| |||| || ||| ||||||||||||
Sbjct: 2786 aggcaacacatttcatagctccggatccaattcgtcggacggaaaagctttttgctgctg 2845
Query: 2828 cagcttctggaaggtggattcttaagaccgattatctaactgcttgta 2875
|||| ||||||||||||||||| ||||| ||||| || ||||||||||
Sbjct: 2846 cagcctctggaaggtggattctgaagactgattaccttactgcttgta 2893
Score = 61.9 bits (31), Expect = 2e-08
Identities = 124/155 (80%)
Strand = Plus / Plus
Query: 1645 catcagcagcaagataaacaggttccatcttcctttgaaggaaaatcagaaacagagaaa 1704
||||||||||| |||||||||| |||||| ||| | | ||||||||||| | ||||||
Sbjct: 1699 catcagcagcaggataaacaggatccatcgccctctaacggaaaatcagagatggagaaa 1758
Query: 1705 tgtcagacgagtgataatttggaagagcttcatgaaggaaataggaacttagttaccaag 1764
| || ||| | | || | ||||||||||||| || |||| | | ||| || ||| ||||
Sbjct: 1759 tctcggactatttctagtatggaagagcttcaggagggaactggcaacctaattagcaag 1818
Query: 1765 caaggcaggaagaagacgattgccaggaagacttt 1799
| ||| ||||||||||| ||||||| || ||||||
Sbjct: 1819 ccaggtaggaagaagacaattgccaagaggacttt 1853
Score = 54.0 bits (27), Expect = 5e-06
Identities = 45/51 (88%)
Strand = Plus / Plus
Query: 2022 tgagattgagactaattttatggatgatgaaactgaggcttcagaggataa 2072
||||| ||| ||||||| ||||||||| |||||||||||| |||||||||
Sbjct: 2067 tgagagtgaaactaattatatggatgaagaaactgaggctctagaggataa 2117
Score = 54.0 bits (27), Expect = 5e-06
Identities = 48/55 (87%)
Strand = Plus / Plus
Query: 2077 gttgatttgtcacataaagcagataatgagatggaactgaaacaagagggggctc 2131
||||||||| ||||| ||||||||||| ||||||| | |||||||||||||||
Sbjct: 2161 gttgatttgccacatcaagcagataatatgatggaaattgaacaagagggggctc 2215