Jatropha Genome Database

JcCA0152151.20
Show Alignment: 
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0152151.20 + phase: 0 
         (1176 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29711.m000332 Chalcone synthase, putative                             890   0.0  

>29711.m000332 Chalcone synthase, putative
          Length = 1164

 Score =  890 bits (449), Expect = 0.0
 Identities = 973/1150 (84%)
 Strand = Plus / Plus

                                                                        
Query: 26   caggtttatcaaaaaaggctaaacctggcacagctacaattcttgctttaggcaaagcat 85
            ||||| ||||||| | ||| || ||||||| |||||||||||| ||| | ||||| ||||
Sbjct: 14   caggtctatcaaagatggccaaccctggcaaagctacaattctggctcttggcaaggcat 73

                                                                        
Query: 86   tccctcatcagcttgtcatgcaagagtttttagttgatgggtatttcaagaataccaatt 145
            | ||||| |||||||| ||||| |||||| | ||||||||||||||||| || |||||||
Sbjct: 74   ttcctcaccagcttgtgatgcaggagtttctggttgatgggtatttcaaaaacaccaatt 133

                                                                        
Query: 146  gttatgatccagacctgaagcagaaactaactagactctgtcagactacaactgttaaaa 205
            |  |||||||||| || |||||||| ||||||||||||||  |||| ||||| || ||||
Sbjct: 134  gcgatgatccagagctcaagcagaagctaactagactctgcaagacaacaaccgtcaaaa 193

                                                                        
Query: 206  caaggtatgtggtaatgtcagaggaaatcctgaacaagtatcctgaacttgccattgaag 265
            |||||||||| || ||||| |||||||| ||| | ||||| || ||||||||  ||||||
Sbjct: 194  caaggtatgtagttatgtcggaggaaatactggaaaagtacccggaacttgcagttgaag 253

                                                                        
Query: 266  gcatccctactgtaaaacaacgattagatatttgtaatgatgctgtaacacaaatggcaa 325
            || |||| ||| | || || ||||||||||| |||||||| ||||||||| ||||||| |
Sbjct: 254  gcctccccactctgaagcagcgattagatatctgtaatgaagctgtaacaaaaatggcta 313

                                                                        
Query: 326  ttgaagcttcagaaacttgcatnnnnnnntggggcaggcctatatcagatattactcact 385
            | ||||||||| | |  || ||       |||||||||||||||||||| || |||||||
Sbjct: 314  tcgaagcttcacagaaatgtataaaaaactggggcaggcctatatcagacataactcact 373

                                                                        
Query: 386  tggtttatgtttcttcaagcgaagctaggctaccaggcggtgaccttcacctagcaagag 445
            | || |||||||||||||| |||||||||||||| || ||||| |||||||| |||||||
Sbjct: 374  tagtgtatgtttcttcaagtgaagctaggctacccggtggtgatcttcaccttgcaagag 433

                                                                        
Query: 446  gtctaggactcagccctgaaacgcagcgtgtcatgctgtatttcatgggttgctctggag 505
            | |||||||||||||||||||| |||||||||| ||| || |||||||| ||||||||||
Sbjct: 434  gactaggactcagccctgaaacacagcgtgtcacgctctacttcatgggctgctctggag 493

                                                                        
Query: 506  gggtcgctggtctccgtgttgcaaaagacatagctgaaaacaatcctggaagtagagttt 565
            | ||    ||||||||  |||||||||| || ||||||||||||||||||||||||||||
Sbjct: 494  gcgtgagcggtctccgcattgcaaaagatattgctgaaaacaatcctggaagtagagttt 553

                                                                        
Query: 566  tgctggctacttctgaaactactataattggatttaggccaccaaatgcagatagaccat 625
            |||| ||||||||||||||||| ||||||||||| |  ||||||| ||||||||||||||
Sbjct: 554  tgcttgctacttctgaaactacaataattggattcaaaccaccaagtgcagatagaccat 613

                                                                        
Query: 626  atgacttagttggggttgcattatttggcgatggtgcaggagctatgataattggcacag 685
            ||||  |||||||||||||||| ||||| |||||||| ||||| |||||||| || ||||
Sbjct: 614  atgatctagttggggttgcattgtttggtgatggtgctggagcaatgataataggaacag 673

                                                                        
Query: 686  acccagtttctaatgttgaaagtccactttttgaacttcatacagcaattcagaatttcc 745
            |||||||||| ||    || |||||||| ||||||||||| |||||||||||||| ||| 
Sbjct: 674  acccagtttcaaagaccgagagtccactctttgaacttcacacagcaattcagaacttct 733

                                                                        
Query: 746  tgcctgatacagaaaagattattgatggcaggatgacagaagaagggattagcttcaagc 805
            |||||||||| ||||||||||||||||||||| | |||||||| ||||| ||||| ||||
Sbjct: 734  tgcctgatactgaaaagattattgatggcaggctaacagaagaggggatcagctttaagc 793

                                                                        
Query: 806  tagcaagagagcttcctcatataattgaagataatattgagagtttctgtcaaaaattaa 865
            |||| || ||||| ||||||||||||||||||||||| ||| | |||||||| ||| |||
Sbjct: 794  tagctagggagctacctcatataattgaagataatatagagggattctgtcagaaactaa 853

                                                                        
Query: 866  tgcgaggtgctggagtaggcgataaagggtacaataattttttctgggcagttcatcctg 925
            || ||| ||||||| ||   |||||||  || ||||| || || |||||||||||||| |
Sbjct: 854  tgggagttgctggactaactgataaagattataataagttgttttgggcagttcatcccg 913

                                                                        
Query: 926  gaggacctgcaatattgaacagaatagagaagcggcttcaattgttgccagagaaattaa 985
            | || |||||||||||||| || || ||||| |||||| | ||||| |||||||||||||
Sbjct: 914  gtggtcctgcaatattgaataggatggagaaacggcttgatttgttcccagagaaattaa 973

                                                                        
Query: 986  atgctagtagacgagctttgatggattatggtaatgctagtagcaatacaattgtgtatg 1045
            ||||||||||| ||||| ||||||||||||| ||||| || || ||||| ||||| ||||
Sbjct: 974  atgctagtagaagagctctgatggattatggcaatgcaagcagtaataccattgtatatg 1033

                                                                        
Query: 1046 ttctcgagtatatgatagaagagagcttgaaaattaacaaggaaaatgaggattgtcaat 1105
            | || || || ||||| |||||||||||||| || ||  ||||||||| | ||  | |||
Sbjct: 1034 tgctggaatacatgattgaagagagcttgaagatgaaggaggaaaatgtgaataatgaat 1093

                                                                        
Query: 1106 ggggattgattcttgcttttgggcctggaattaccttggaaggagttcttgccagaaacc 1165
            |||| ||||| ||||||||||| |||||||||||||| || ||| || | ||||| ||||
Sbjct: 1094 ggggcttgatacttgcttttggacctggaattacctttgagggaattttagccaggaacc 1153

                      
Query: 1166 tcagtgtcta 1175
            ||| ||||||
Sbjct: 1154 tcactgtcta 1163