Jatropha Genome Database
- JcCA0151971.20
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0151971.20 + phase: 0
(1752 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30190.m011227 hypothetical protein 379 e-104
>30190.m011227 hypothetical protein
Length = 1755
Score = 379 bits (191), Expect = e-104
Identities = 1083/1379 (78%), Gaps = 14/1379 (1%)
Strand = Plus / Plus
Query: 341 atgctgccttgaatgatctcaaaagttatatgcattctttgttagaagaacttaaagtta 400
||||||| ||| |||||||||||| || ||| | |||||| | ||||||||||||||||
Sbjct: 350 atgctgctttggatgatctcaaaaactacatgaactctttgctggaagaacttaaagtta 409
Query: 401 ccagaaaaaatttgttatcatggatgagggaagaaatgcagaaactggtggcagaggaga 460
| ||||| |||||| |||||||||||| |||||| ||| ||| |||||| ||||||||
Sbjct: 410 caagaaagaatttggtatcatggatgaaggaagagatggcgaagttggtggaagaggaga 469
Query: 461 aagattctgagtcagaaaggaaagaagtcatctttgaaggagaaaaagtccaatctcagt 520
||| |||||| |||||||||||||||| || ||| |||||| || ||||| |||
Sbjct: 470 aagcttctgaatcagaaaggaaagaaggcagttttagaggagaggaaaaccaattgaagt 529
Query: 521 accagaacaattctgaagagaatgcagaagttcagtaccaaaacctctttgggaagaaca 580
| |||||||| ||||| |||||||| ||||| |||||||| |||||||| |||||||
Sbjct: 530 atcagaacaactctgaggagaatgctcgcgttcaataccaaaatctctttggtaagaaca 589
Query: 581 tccaagtccaacctcaaaacaaacttgcggagtatggtcaagcgcataaccaaagcaagt 640
|||||||||| | ||| || || ||| ||| ||| |||| |||| |||| |||||||
Sbjct: 590 tccaagtccagcatcagaataactttgaggactatagtcagttgcatcaccagagcaagt 649
Query: 641 ttaaggagaatgtgcatatgcaatacctaatcaacttggaggagaacattggagtac--- 697
|| || | ||||| || | ||| | ||||||||||||| |||||||||| | |||
Sbjct: 650 ttgagaaaaatgtccagacgcagcagataatcaacttggaagagaacattgaattacagc 709
Query: 698 ctcaaaagaactctcaggaaaatgttcaactgcagaatcggaataaggtcagatcctcaa 757
|||||||||||| | ||||||| |||||| ||||| || || ||| ||||| | |
Sbjct: 710 ctcaaaagaactgtaaggaaaaggttcaagtgcagcgtcataacaagatcagaactggta 769
Query: 758 caagagctcggacttgtaatggcagacctcctaagaggtgtagtaaaagcaagaaatcag 817
|| | | ||| | ||| |||||| ||||| || | |||| ||||| || |||||||| |
Sbjct: 770 caggcggtcgaagttgcaatggcggaccttctcaaaggtatagtagaaacaagaaattgg 829
Query: 818 ttgattctgatacttattctccaattcttgaagatcagattgactatagccgagctattg 877
||||||| | | | ||||| | ||||||||||| ||| ||||| || || ||||
Sbjct: 830 ctgattctaaca---acactccagtacttgaagatcaagctgattatagtcgcgcgattg 886
Query: 878 tgcttgtgga-accaactgaagagaatggaaaagagagattggcattggctgacaagtca 936
| ||||| || ||||||||||| |||||| |||| ||||||||||| |||||||||||
Sbjct: 887 t-cttgttgacaccaactgaagggaatggggaagatagattggcattacctgacaagtca 945
Query: 937 aattccaagtccagtgtcacagaccagaatatgca------gcaacagaagagcattgtt 990
| ||| |||| | | ||||| |||| |||| ||||||||||||||||||
Sbjct: 946 atttctaagtttggcccctcagactcgaatctgcaagcacagcaacagaagagcattgtc 1005
Query: 991 ttggccataagagctcaaaatggcaatagtggatcttcattgaagtctgcaaaaggcnnn 1050
|| | |||||||||||||||| |||| ||||||| || |||||||||||||||||
Sbjct: 1006 ttaggcataagagctcaaaattgcaacggtggatccccagtgaagtctgcaaaaggcaaa 1065
Query: 1051 nnnnctgctaattctagtaatcactttcaactacccgattatcaagttaattacagccga 1110
||||||| |||| | |||||| ||| | ||| || |||||||| ||| ||||| |
Sbjct: 1066 agagctgctaaatctaatgatcactgccaagtgcccaatgatcaagttgatttcagccaa 1125
Query: 1111 actattggatccataacttcagctgagaaggacaagggagaaaggtcaggattatcttta 1170
|||||||| |||| || || ||| ||||||||| |||||||| ||| |||||| | |
Sbjct: 1126 ggtattggattcatagctccaactgggaaggacaaaggagaaagatcaagattatatatg 1185
Query: 1171 gagccaacttttacatgtgattccttcagtcaggcagcttcatcaatgtacttaacatta 1230
||||||| ||| | | | ||||||||| |||| |||||||||| ||||||||||| |||
Sbjct: 1186 gagccaaacttttcttctaattccttcaatcagacagcttcatcgatgtacttaacgtta 1245
Query: 1231 ccaagtgtcctaacaaaaacccattttccaattcacaggcctgatacttcttcatttagc 1290
|||| ||| ||| | || | ||| ||| || ||| || ||||||||||||||| ||| |
Sbjct: 1246 ccaactgtactagcgaatcctcatattcaaaatcatagacctgatacttcttcaattaac 1305
Query: 1291 tatcttcagcaaagaactgctcagaatcagccagccattagttcagaaagatcaaatatg 1350
||| |||| | ||||| | | ||||| || ||| || | | |||||| ||| ||
Sbjct: 1306 tattttcaaccaagaattccccagaaccaagcaggaataaatgcagaaaaatcggatcca 1365
Query: 1351 atgtttggttcgagtagtcatcttggatactttcaaggcatgcagcctgcagaagaaaga 1410
|| | ||||| || || |||||||||||| |||| |||||| || ||||||| |||
Sbjct: 1366 atactaggttcaagcagctatcttggatactatcaaagcatgctgcagccagaagacaga 1425
Query: 1411 agtagaaactacgctaaacttagctctagagatatcagtttcttcaaccagaacagtact 1470
|||||||||||| || || | || | ||| |||||||||| ||| |||||||| | ||
Sbjct: 1426 agtagaaactactctcaaatgagttatagcgatatcagttcctttaaccagaatggcaca 1485
Query: 1471 acaacttcaattcttggagatggattcacagttcctctccagactgtgagtgggggtttt 1530
|| |||||| || ||||| ||||| ||||||||||||| ||| |||| ||||| || |||
Sbjct: 1486 actacttcatttgttggacatggagtcacagttcctctgcaggctgtaagtggaggattt 1545
Query: 1531 agcatgccaaatcaatttgacatggaaaatctaccgcgagagaataacaacacacttggt 1590
| ||| ||||| ||||||||| |||||| ||||| | | |||| || |||||||||
Sbjct: 1546 aacattccaaaccaatttgacttggaaagcctacccaggaaaaatagtaatacacttggt 1605
Query: 1591 ttgacaatgaatggaggagccataaggttttctggtggaggctactctttaccagaacct 1650
|| |||||||||||||||| || |||||||| |||| ||| ||||||||||||||||||
Sbjct: 1606 ctgtcaatgaatggaggagctatcaggttttccggtgaaggttactctttaccagaacct 1665
Query: 1651 tacattgccaacaacttccatggccttccaaattatagagttgatggcagactaatgac 1709
|||||||||||||||||||| ||| | |||||||||||| |||||||||||||||||
Sbjct: 1666 tacattgccaacaacttccacagccattcaaattatagagcagatggcagactaatgac 1724
Score = 129 bits (65), Expect = 6e-29
Identities = 113/129 (87%)
Strand = Plus / Plus
Query: 1 atgggagatgaactgaaattccagcagcggtgggagtatagaaggaggcacagtgacttt 60
|||||||| |||||||||||||||||||| ||||| | ||| ||| | |||||||||||
Sbjct: 1 atgggagaggaactgaaattccagcagcgctgggattttaggaggggtgacagtgacttt 60
Query: 61 gattcttcaagcaatgattctaaatacagtttaggtggtgagccagcttgtaagaagcac 120
|||||||||||| |||||||||||| ||||||||||||||| |||||| ||| |||||
Sbjct: 61 gattcttcaagctatgattctaaatccagtttaggtggtgaaccagctcataaaaagcat 120
Query: 121 aaactggcc 129
| |||||||
Sbjct: 121 agactggcc 129