Jatropha Genome Database

JcCA0151971.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0151971.10 + phase: 0 /partial/short
         (147 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30190.m011226 UDP-n-acetylmuramoylalanyl-d-glutamate--2,6-diamin...   220   2e-57

>30190.m011226
            UDP-n-acetylmuramoylalanyl-d-glutamate--2,
            6-diaminopimelate ligase, putative
          Length = 2343

 Score =  220 bits (111), Expect = 2e-57
 Identities = 135/143 (94%)
 Strand = Plus / Plus

                                                                        
Query: 5    ttgctggtaaaggccatgagacatatcaaattgaaggtgacaaaagagagttcttcgatg 64
            ||||||||||||||||||||||||| ||||||||||||||||||| ||||||||| ||||
Sbjct: 2174 ttgctggtaaaggccatgagacataccaaattgaaggtgacaaaaaagagttctttgatg 2233

                                                                        
Query: 65   atcgtgaggagtgcagggaagctttgcagtatgttgatgagcttcatcaagctgggatag 124
            | || |||||||||||||||||| |||| ||||||||||||||||| |||||||||||||
Sbjct: 2234 accgggaggagtgcagggaagctctgcaatatgttgatgagcttcaccaagctgggatag 2293

                                   
Query: 125  acacaagtgaatttccatggcgg 147
            |||||||||||||||||||||||
Sbjct: 2294 acacaagtgaatttccatggcgg 2316