Jatropha Genome Database
- JcCA0151951.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0151951.10 + phase: 0 /pseudo/partial
(1047 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30138.m004044 sensory transduction histidine kinase, putative 545 e-154
>30138.m004044 sensory transduction histidine kinase, putative
Length = 1653
Score = 545 bits (275), Expect = e-154
Identities = 644/767 (83%)
Strand = Plus / Plus
Query: 280 gttaatggtactcaattacatgaaaatggggagacacgagagagctattcacaagatgaa 339
||||||| | ||||||||||||||||| | ||||| | |||||||| ||||||||||
Sbjct: 883 gttaatgatgctcaattacatgaaaatagagagacgtggcagagctatccacaagatgat 942
Query: 340 ttttgtcgcagttctagtgtccctgattctatatcaatggagagatcttgcaccccaccc 399
|| || | |||||||| ||||||||||||| || | |||||||||||||||||||||
Sbjct: 943 ttccgtagtagttctagcatccctgattctatttctctagagagatcttgcaccccaccc 1002
Query: 400 atgtcaagggaatttcctcaaaagaattccaaggatgaaagtctctctctggtgcttatg 459
||||| || ||||| |||| |||| |||||| || | ||| ||| |||| |||
Sbjct: 1003 atgtcgtcagagtttccgcaaagaaatttcaaggacgacaagctccctcaggtgtttaca 1062
Query: 460 cattcaagaaatgacctacaacttgatgcatctggtttatccacacaaaatgtctatcca 519
|| | | |||||| || |||||||| | || ||||| || ||||||| | | ||||||
Sbjct: 1063 aatccgataaatgaacttcaacttgacacttcaggtttgtctacacaaagtatgtatcca 1122
Query: 520 tattatatgtcaggagttgtgaaccaagttttaatgccttcatcagcacaactgtatcaa 579
||||| ||||| |||||||| || ||||| | ||||| ||||||||||||| ||||||
Sbjct: 1123 tattacatgtctggagttgtcaatcaagtaattatgccaccatcagcacaactatatcaa 1182
Query: 580 aagaatcttcatgagctgcaaactaatgtgccttcagctataatgcctcaatacaatcat 639
|||||||| |||||| |||||| ||||| |||||| |||| |||||||||||||||||
Sbjct: 1183 aagaatctgcatgagttgcaaaataatgcaccttcacctatgctgcctcaatacaatcat 1242
Query: 640 ctgcaacaatgttcccctcatgtgactggaatggcatcattcccctattaccctgttaac 699
|| ||||||||||||||||| || | ||||||||||||||||| || ||||||||
Sbjct: 1243 ctttcccaatgttcccctcatgtcgctagcatggcatcattcccctactatcctgttaat 1302
Query: 700 atatgtttacaacctggtcaaatgcctactgctcattcatggccatcatttggaaattca 759
|||||||||||||||||||||||||| || ||||| ||||||||||||||||| ||||
Sbjct: 1303 ttatgtttacaacctggtcaaatgcctcctactcatccatggccatcatttggaggttca 1362
Query: 760 tcttctgctgatgtgaaaatcaataaagtagatagaagggaagcagcattgatgaagttt 819
||||| | ||||||||||| || ||| ||||||||||||| || ||||||||||| |||
Sbjct: 1363 tcttcccccgatgtgaaaataaaaaaattagatagaagggaggctgcattgatgaaattt 1422
Query: 820 agacagaaaaggaaagaacgttgctttgataagaagattaggtatgttaatcggaaaaaa 879
||||||||||| ||||| || || ||||||||||||||||||||||||||||| |||||
Sbjct: 1423 agacagaaaagaaaagagcggtgttttgataagaagattaggtatgttaatcgcaaaaag 1482
Query: 880 cttgctgaaaggaggccacgggtccggggccagtttgtcagaaaggtaaatggtgtaaat 939
||||||||||||||||| || || ||||| |||||||| || ||| ||||||||||||||
Sbjct: 1483 cttgctgaaaggaggcctcgtgtgcggggacagtttgtgaggaagttaaatggtgtaaat 1542
Query: 940 gtggatcttaatgggcaaccttctactgattatgatgaagatgaagacgacgatgaggat 999
||||||||||||||||||||| || ||||||||||||| |||||||| || |||||||||
Sbjct: 1543 gtggatcttaatgggcaacctgctgctgattatgatgaggatgaagaagaggatgaggat 1602
Query: 1000 gaacatgcatcgagggattcttctccggaagatgatgcttcaggatc 1046
|| | ||||| |||| |||||||| ||||| ||||||||||||||
Sbjct: 1603 gagcttgcattaaggggttcttctctcgaagaggatgcttcaggatc 1649
Score = 172 bits (87), Expect = 3e-42
Identities = 147/167 (88%)
Strand = Plus / Plus
Query: 8 gcttggattggtggagaagaacatcttgagttatgactttgatctggtggcatcagatcc 67
|||||| |||| |||||||||||||||| ||||||||||||| |||| |||||||||||
Sbjct: 438 gcttggtttggcagagaagaacatcttgatttatgactttgatttggtagcatcagatcc 497
Query: 68 tagtgatgccaatacaaatagcactactctgttctcagatgacacagatgacaggtctag 127
|||||||||||| |||||||| |||||||| |||||||||||||||||||||| |||| |
Sbjct: 498 tagtgatgccaacacaaatagtactactcttttctcagatgacacagatgacaagtctcg 557
Query: 128 gaagtgcacaaacccagaaataggcatatcaattcatcaggaagatg 174
|| ||| ||| |||||||| || |||||| ||||||||||||||
Sbjct: 558 taaatgcctaaatccagaaattggtgtatcaactcatcaggaagatg 604
Score = 54.0 bits (27), Expect = 2e-06
Identities = 48/55 (87%)
Strand = Plus / Plus
Query: 223 gcaatccactagagtatcggcctgatgtgcctaaaataagtgaccgtagaacagc 277
|||||| |||||| ||||| ||||||||||| ||||||||| |||||||||||
Sbjct: 650 gcaatcgactagaatatcgacctgatgtgccgggaataagtgatcgtagaacagc 704