Jatropha Genome Database

JcCA0151911.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0151911.10 + phase: 2 /partial
         (439 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29709.m001229 3-hydroxybutyryl-CoA dehydratase, putative              287   3e-77

>29709.m001229 3-hydroxybutyryl-CoA dehydratase, putative
          Length = 1155

 Score =  287 bits (145), Expect = 3e-77
 Identities = 360/431 (83%), Gaps = 3/431 (0%)
 Strand = Plus / Plus

                                                                        
Query: 11   attgacagatgtttctctcagagaacagttgaagatattttgtctactctcgagagggag 70
            ||||| |||||||| ||||| ||| | |||||||||||| | ||  | || |||||||||
Sbjct: 721  attgatagatgtttttctcaaagatctgttgaagatattatatcagcccttgagagggag 780

                                                                        
Query: 71   accatgaataat---gcagatgcttggatattaaccacaattcagtcattgaagaaggct 127
             ||||||| |||   |||||||||||||| |  || |||||||||| | |||||||||||
Sbjct: 781  gccatgaaaaataaggcagatgcttggatctctacgacaattcagttactgaagaaggct 840

                                                                        
Query: 128  tctccaacaagtcttaagatttctcttagatcgattagaaagggaaggctcgaaggcgtt 187
            ||||||||||||||||| |||||||||||||| |||||| | ||||||||  |||| |||
Sbjct: 841  tctccaacaagtcttaaaatttctcttagatcaattagagaaggaaggcttcaaggtgtt 900

                                                                        
Query: 188  gggcaatgccttgtgcgtgagtacagaatggtttgtcatgtcatgcagggaaaagttagc 247
            || ||||||||||| || ||||| ||||||||||| ||||||||||  |||||| |||||
Sbjct: 901  ggtcaatgccttgttcgcgagtatagaatggtttgccatgtcatgcgaggaaaacttagc 960

                                                                        
Query: 248  aaggatttctttgagggttgcagagctatactgttggacaaggataggaacccaaagtgg 307
            || ||||| ||||||||||||||||||||| |||| || ||||||| ||| |||||||||
Sbjct: 961  aatgatttttttgagggttgcagagctatattgttagataaggataagaatccaaagtgg 1020

                                                                        
Query: 308  gaacctcctaaattggagctcgtgagtaacagtaatgttgagcagtacttttccaaaata 367
            |||||||| |||||||  |||||  |  ||||||| |||||||| ||||| |||||| | 
Sbjct: 1021 gaacctccgaaattgggcctcgtctgcgacagtaaggttgagcaatacttctccaaagtg 1080

                                                                        
Query: 368  gatgacgaagagtgggaagatttgaagctgcctgctcggcgtcacctgcctggatatgcc 427
            ||||| | ||| ||||||||| | ||||| | ||||||     || ||||||||| ||||
Sbjct: 1081 gatgatggagaatgggaagatctaaagcttcgtgctcgtttcaacttgcctggatgtgcc 1140

                       
Query: 428  actgcaaagct 438
            ||||| |||||
Sbjct: 1141 actgctaagct 1151