Jatropha Genome Database

JcCA0151491.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0151491.10 + phase: 0 /partial
         (399 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

28281.m000367 conserved hypothetical protein                          498   e-140

>28281.m000367 conserved hypothetical protein
          Length = 1128

 Score =  498 bits (251), Expect = e-140
 Identities = 362/399 (90%)
 Strand = Plus / Plus

                                                                        
Query: 1    gttgttggagacagaaaaggtgcagtttttggcggcttggttgaggcaccactaagacca 60
            |||||||||||||||||||||||||||||||| ||| ||||||||||||| |||||||||
Sbjct: 727  gttgttggagacagaaaaggtgcagtttttggtggcctggttgaggcacccctaagacca 786

                                                                        
Query: 61   accaacaagagaaaatatcagggaacaaacagcacctttgttttcacgaatacacctggc 120
            || |||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||
Sbjct: 787  acgaacaagagaaaatatcagggaacaaacagcacctttgttttcactaatacgcctggc 846

                                                                        
Query: 121  caccctgtgatattccgccccacaggtgcaaatcgctatttcactttgtgctcttctgac 180
             | |||||||||||||| || |||||||||||||||||||||||||||||| |  | |||
Sbjct: 847  gatcctgtgatattccgaccaacaggtgcaaatcgctatttcactttgtgcacaacagac 906

                                                                        
Query: 181  tttctggcgattggagggggtggtcactttgcactctacttggacggtgatttattaaat 240
            || || || ||||| |||||||| ||||||||||||||||||||||||||| ||||||||
Sbjct: 907  ttcctagcaattggtgggggtggccactttgcactctacttggacggtgatctattaaat 966

                                                                        
Query: 241  ggatcgagctcagtctcagagacatatggaaacccgtgtcttgcacagtcggaagacttt 300
            ||||| ||||| || ||||| || ||||| ||||| ||||||||||  || |||||||||
Sbjct: 967  ggatcaagctcggtatcagaaacctatgggaacccttgtcttgcacgctccgaagacttt 1026

                                                                        
Query: 301  gaagtaaaagaagttgagctatggggctttgtatacggtaccaagtatgaggaaatactt 360
            ||||| |||||||||||| | ||||||||||| || ||||| ||||||||||| ||||||
Sbjct: 1027 gaagttaaagaagttgagttgtggggctttgtgtatggtacgaagtatgaggagatactt 1086

                                                   
Query: 361  gctttgagcagaacagaggctcctgggatttgccggtgg 399
            |||||||||||||||||||||||||||||||||||||||
Sbjct: 1087 gctttgagcagaacagaggctcctgggatttgccggtgg 1125