Jatropha Genome Database

JcCA0151101.20
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0151101.20 - phase: 2 /partial
         (340 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30147.m014379 Rhicadhesin receptor precursor, putative                 86   2e-16

>30147.m014379 Rhicadhesin receptor precursor, putative
          Length = 657

 Score = 85.7 bits (43), Expect = 2e-16
 Identities = 88/103 (85%)
 Strand = Plus / Plus

                                                                       
Query: 171 tgctccatttctgcgcgaatgctggcaacgaggatgctactgtttactcagtattcaaca 230
           ||||||| ||||||  |||||||||||| || | ||||||||| ||||||||| | || |
Sbjct: 455 tgctccacttctgcttgaatgctggcaatgatgctgctactgtatactcagtactgaata 514

                                                      
Query: 231 gccagaacccaggattggtgagtattgctggtgcaatgtttga 273
           |||| || |||||| |||||| | |||||||||||||||||||
Sbjct: 515 gccaaaatccaggagtggtgaatgttgctggtgcaatgtttga 557