Jatropha Genome Database
- JcCA0150831.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0150831.10 + phase: 0
(2526 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30182.m000133 pentatricopeptide repeat-containing protein, putative 2181 0.0
>30182.m000133 pentatricopeptide repeat-containing protein, putative
Length = 2526
Score = 2181 bits (1100), Expect = 0.0
Identities = 1916/2188 (87%)
Strand = Plus / Plus
Query: 290 gtgggtcttctcagtggactgaggacatacagtatttagatgaatctggtggtgtgattt 349
|||||||| || ||||||||||||| ||| ||||| ||||||| ||||| |||||||||
Sbjct: 305 gtgggtctgctaagtggactgaggatatagagtatctagatgagtctggaagtgtgattt 364
Query: 350 atagtggtaaaggaataaggtcagttgagccaggggttgatgatcatgtgatggttggtg 409
||||||||||||| || ||||||| ||||| ||| | ||||| ||||||||||||||||
Sbjct: 365 atagtggtaaaggtattcggtcagtcgagccggggctcgatgaccatgtgatggttggtg 424
Query: 410 gattgaagaagccatttatgaatgtcactgctgttgcaaagattgttgaagttgttaaga 469
| | ||||| |||||| ||||||| |||| ||||| ||||||||||| |||| ||||
Sbjct: 425 ggctaaagaaaccatttttgaatgttgctgcagttgctaagattgttgagattgtaaaga 484
Query: 470 ggtggaaatgggggccagaattggagacccacttggataagcttcaatttttgccaaaca 529
|||||||||||||||||||||| |||||||| ||||||||| | |||||| | || | ||
Sbjct: 485 ggtggaaatgggggccagaattagagacccaattggataagttacaatttgtacctagca 544
Query: 530 tgactcatatacttcaagctttgaaaattgtcaatgatattgatgcgtcattgagtttgt 589
|||||||| | ||||||||||||||||| | |||||| ||||| | ||||||||||
Sbjct: 545 tgactcatgttgttcaagctttgaaaattattaatgatgctgatgggatgttgagtttgt 604
Query: 590 ataaatgggccaagaggcaatcttggtatgtgccaaatgaagaatgctacttgttgttgt 649
||||||||| ||||||||| |||||||||| |||| |||||||| | ||||||
Sbjct: 605 ttaaatgggcaaagaggcaaacttggtatgtagtggatgatgaatgctatgcgctgttgt 664
Query: 650 ttgatgcgttgaatcaaagtagagattttgatgcaattcaatctttgtttgatgagatgg 709
|||||| |||||| ||| |||||||||||||| ||||||||| ||||||||||| ||||
Sbjct: 665 ttgatggattgaataaaattagagattttgatggaattcaatccttgtttgatgaaatgg 724
Query: 710 ttcaagattcaagcaaggatgggatatcctcatttgatgcatataatagggtgattcaat 769
| ||||||||||| |||| ||||||||| || || |||||||||||||||| ||||||
Sbjct: 725 tacaagattcaagtaagggtgggatatcttctgtttatgcatataatagggtaattcaac 784
Query: 770 atctagctaaagcagagaagttggagctggcattttgttgtttcaagaaagttcagggtt 829
|| | ||||||||||||||||||||| | ||||||| || || ||||| ||||||| ||
Sbjct: 785 atttggctaaagcagagaagttggagttatcattttgctgctttaagaaggttcaggatt 844
Query: 830 cgggtggtaaagttgacacacagacatataatgcactcataaccttgtttctgaataagg 889
|||| ||||| |||| ||||| |||||||||||||| ||||| | ||| |||||||||
Sbjct: 845 cgggctgtaaaattgatacacaaacatataatgcacttataacatcatttttgaataagg 904
Query: 890 gcttgccttacaaatcatttgagatatatgaaagcatggaagcagcacaatgttcattgg 949
|||||||||| ||| | ||||||||||| || |||||| |||||||||||||||||||||
Sbjct: 905 gcttgccttataaagcttttgagatatacgagagcatgcaagcagcacaatgttcattgg 964
Query: 950 atagctcaacttatgagttgatgataccaagcttagcaaaatccggtcgtcttgatgtgg 1009
|| ||| || ||||||||||||||||||||||| ||||| || |||||||| |||||||
Sbjct: 965 atgcctccacatatgagttgatgataccaagcttggcaaagtcaggtcgtctagatgtgg 1024
Query: 1010 cttttaaacttttccaagagatgaaagaaaggaatattcggccaagcttcggcatctttt 1069
||||||| |||||||||||||||||||||||||| || ||||||||||| ||||| ||||
Sbjct: 1025 cttttaagcttttccaagagatgaaagaaaggaaaatccggccaagctttggcatttttt 1084
Query: 1070 cctcacttgttgattcgatgggaaaagctgggaggttagacacagctatgaagatttaca 1129
|||||||||||||||| ||||| ||| | |||||||| |||||| | ||||| ||||| |
Sbjct: 1085 cctcacttgttgattcaatggggaaatcagggaggttggacacatcaatgaaaatttata 1144
Query: 1130 tggaaatgaggggttttgggcttagaccatctgcaaccatgtacgcatctttgattgagt 1189
|||||||| ||||||||| |||||| ||||||||| ||||| | |||||||| ||||
Sbjct: 1145 tggaaatgcagggttttggacttagatcatctgcaagtatgtatgtttctttgatcgagt 1204
Query: 1190 catatacaaaggctgggaagttagatactgcccttaggctttgggatgagatgaagaaag 1249
||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 1205 catatactaaggctgggaagttagatactgctcttaggctttgggatgagatgaagaaag 1264
Query: 1250 ctggctttaggcctaactatgggttgtacacgttgattgttgaatcaaatgcaaagtcag 1309
|||| |||||||| || ||||||||||| || || ||| ||||||| ||||||||||||
Sbjct: 1265 ctggatttaggccaaattatgggttgtatacattaattattgaatcccatgcaaagtcag 1324
Query: 1310 ggaaactcgatactgcaatgtctatctttaatgatatggaaaaggctggatttctcccca 1369
| || || |||| ||||| ||||||||||| |||||||| |||||||||||||| ||||
Sbjct: 1325 gaaagcttgatattgcaacatctatctttaaagatatggacaaggctggatttctgccca 1384
Query: 1370 ccccatctacatattcatgccttcttgaaatgcacgctgcctctggacaagtagattcag 1429
||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||| |
Sbjct: 1385 ccccatctacatattcatgtcttcttgaaatgcatgctgcctctggacaagtagattctg 1444
Query: 1430 ccatgaagctgtataactcgatgactaacgctggtctgagaccaggtatgagtacatata 1489
| |||||||| |||||||| |||||||| || ||| ||| ||| ||| ||||||| || |
Sbjct: 1445 caatgaagctatataactcaatgactaatgccggtttgaaacctggtttgagtacgtaca 1504
Query: 1490 ctgctattttgactcttctggctagtaagaaacttgtggatgtggctgccaaaattttgc 1549
|||| |||| |||||||||||||||||||| ||||| ||||||||||||||||| || |
Sbjct: 1505 ctgcccttttaactcttctggctagtaagaagcttgtagatgtggctgccaaaatattac 1564
Query: 1550 ttgaaatgaaggccatggggttttccgttgatgtgagtgcaagtgatgtattaatggtgt 1609
||||||||||||||||||| ||||| |||||||||||||| |||||||| |||||||| |
Sbjct: 1565 ttgaaatgaaggccatgggattttctgttgatgtgagtgccagtgatgttttaatggtat 1624
Query: 1610 acattaaagatggttctgtcgaccttgccttgaggtggctacgcttcatggattcatcag 1669
||||||| ||||||||||| ||||||||||||||||||||| | ||||||| ||||| |
Sbjct: 1625 acattaaggatggttctgttgaccttgccttgaggtggctaagtttcatgggctcatccg 1684
Query: 1670 ggataagaacgaataattttataatcaggcagttgtttgaatcttgcatgaagaatggct 1729
| || ||||| |||||||| ||||| |||||||||||||| |||||||||||||| || |
Sbjct: 1685 gaattagaacaaataatttcataattaggcagttgtttgagtcttgcatgaagaaaggtt 1744
Query: 1730 tgtatgaatcagctaagcctctccttgagacctatgtgaactctgctgctaaagtggatc 1789
| || |||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1745 tatacgaatcagccaagcctctccttgagacctatgtgaactctgctgctaaagtggatc 1804
Query: 1790 ttgtactttacacatcaattcttgcccatcttgtccgatgccaagaagagcagaatgaga 1849
| ||||||| ||||||||||||||| |||||||||||||||||||||||||| ||||||
Sbjct: 1805 tcatactttatacatcaattcttgccaatcttgtccgatgccaagaagagcagcatgaga 1864
Query: 1850 ggcatttgatgttgatccttggtgccacaagacataaggctcacaaatttatgtgtgggc 1909
|||||||||||| |||||||| || |||||||||||||| || |||||||||||||
Sbjct: 1865 ggcatttgatgtcaatccttggcgctacaagacataaggcacatgcttttatgtgtgggc 1924
Query: 1910 tattcactggtccggaacagagaaaacaacctgtgctatcctttgtgagggagttttttc 1969
| ||||||||||| || |||||| | ||||| ||| ||| |||||| || ||||| ||||
Sbjct: 1925 ttttcactggtccagagcagagacagcaaccagtgttattctttgtaagagagttctttc 1984
Query: 1970 agggcattgattatgaattggaagagggtgctgcaaggtactatgttaacgttttgctca 2029
||||||| |||||||| ||||||||||||||||||| ||||| ||| || ||||||||||
Sbjct: 1985 agggcatagattatgatttggaagagggtgctgcaaagtactttgtaaatgttttgctca 2044
Query: 2030 attaccttgttcttatgggtcaaattaaccgtgctcgatgtgtttggaaagtcgcttatg 2089
||||||||||||||||||| ||||| ||||| ||||||||||||||||| || || || |
Sbjct: 2045 attaccttgttcttatggggcaaataaaccgagctcgatgtgtttggaaggttgcgtacg 2104
Query: 2090 agaataagctttttccgaaggctatagtttttgatcagcatattgcttggtcccttgacg 2149
|||| |||||||| || ||||||||||| ||||||||||||||||||||||||||||| |
Sbjct: 2105 agaacaagcttttcccaaaggctatagtatttgatcagcatattgcttggtcccttgatg 2164
Query: 2150 ttagaaatttgtcagttggagctgctcttatagcagttgtgcacactcttcataggttcc 2209
| || || |||| || |||||||||||||||||||||||||||||||| |||||||||
Sbjct: 2165 tcaggaacctgtcggtaggagctgctcttatagcagttgtgcacactctccataggttca 2224
Query: 2210 gaaagcgcatgttgtactatggtgtcattccaaggcgcatcaaattggttactggaccca 2269
||||||||||||| || ||||||||| | ||||| ||||| ||||||||||| |||||||
Sbjct: 2225 gaaagcgcatgttatattatggtgtcgtaccaagacgcattaaattggttacaggaccca 2284
Query: 2270 ctttgaagatagtggttgcgcagatgttgagctcagtagagtctccatttgaagttagca 2329
| ||||||| |||||||||||||||||||||||||||||||| |||||||| || ||||
Sbjct: 2285 cactgaagattgtggttgcgcagatgttgagctcagtagagtccccatttgaggtaagca 2344
Query: 2330 aagtggttctgagagccccaggggactctgttatggagtggtttaagaaacctatagtgc 2389
| |||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 2345 aggtggttctaagagccccaggggactctgttatggagtggtttaagaaacctattgtgc 2404
Query: 2390 agcagtttcttctgaatgagattccttctagagctgatatactcatgcacaaactaaata 2449
|||||||||||||||||||||||||||| || ||||||||||||||||| || ||||| |
Sbjct: 2405 agcagtttcttctgaatgagattccttcaagggctgatatactcatgcataagctaaaca 2464
Query: 2450 ctctatttcctagttctgcacctgaaat 2477
| || |||||||||||||||||||||||
Sbjct: 2465 cactgtttcctagttctgcacctgaaat 2492