Jatropha Genome Database

JcCA0150341.20
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0150341.20 + phase: 0 /pseudo
         (322 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29830.m001424 Adipocyte plasma membrane-associated protein, puta...    58   3e-08

>29830.m001424 Adipocyte plasma membrane-associated protein,
           putative
          Length = 1143

 Score = 58.0 bits (29), Expect = 3e-08
 Identities = 86/105 (81%)
 Strand = Plus / Plus

                                                                       
Query: 203 ggacccgaagatacagcatatgacagcaagtcggggctgatttacacgagctgtcaagat 262
           ||||| |||||||  |||| |||||||||||| ||||| ||||| || || |||  ||  
Sbjct: 250 ggaccagaagatattgcatttgacagcaagtcagggctcatttatacaagttgtgcaggc 309

                                                        
Query: 263 gggtggatcaagcgagtcacggtgaatgactcggtgtctgactcg 307
           |||||||| |||||||| || || || ||||||||| ||||||||
Sbjct: 310 gggtggataaagcgagttacagtcaacgactcggtgactgactcg 354