Jatropha Genome Database
- JcCA0150301.20
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0150301.20 + phase: 0
(1440 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29646.m001117 acyl-CoA oxidase, putative 1039 0.0
>29646.m001117 acyl-CoA oxidase, putative
Length = 1878
Score = 1039 bits (524), Expect = 0.0
Identities = 821/920 (89%)
Strand = Plus / Plus
Query: 493 aagtggcttagggacaccgaaacttatgcaattaaaggttgctttgctatgacagaattg 552
|||||||| ||| |||| |||||||||||| | || ||||||||||||||| ||||||||
Sbjct: 358 aagtggctgaggaacactgaaacttatgcactcaagggttgctttgctatgtcagaattg 417
Query: 553 gggcatggaagtaatgtccgaggaattgaaactgtcactatatatgattcgaacacaggg 612
|||||||||||||||||||||||||||||||| ||| | | |||||||| ||||||||
Sbjct: 418 gggcatggaagtaatgtccgaggaattgaaacagtcgccacctatgattcaaacacagga 477
Query: 613 gaatttgtaatcaatactccttgtgaatcagctcagaagtattggattggtggagctgct 672
|| ||||| ||||| |||||||||||||||||||| ||||||||||||||||| ||||||
Sbjct: 478 gagtttgtcatcaacactccttgtgaatcagctcaaaagtattggattggtggggctgct 537
Query: 673 aatcatgcaacgcacaccatagtgttctcacagctcaatataaatgggatgagtgaaggg 732
||||||||||| ||||| |||||||| |||||||||||||||||||||| || | ||||
Sbjct: 538 aatcatgcaacacacacgatagtgttttcacagctcaatataaatgggacgaatcaagga 597
Query: 733 gtgcatgcattcatagcccaaatcagggatgcagatggaaacatatggcctaacatccga 792
|| |||||||| |||||||| |||||||| |||| || |||||||| ||||| || ||
Sbjct: 598 gttcatgcatttatagcccagatcagggacacagaagggaacatatgccctaatattcgt 657
Query: 793 atagctgattgtggtcataaaattggtttgaatggtgttgataatggtcgaatctggttt 852
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 658 atagctgattgtggtcataaaattggtttaaatggtgttgataatggtcgaatctggttt 717
Query: 853 gacaatgtgagaatccccagagagaatctgttgaattcagtagctgatgtttcaccggat 912
||||| ||||||| |||||||||||| |||||||||| || |||||||||||||| |||
Sbjct: 718 gacaacatgagaattcccagagagaatttgttgaattcggttgctgatgtttcaccagat 777
Query: 913 ggacaatatcttagtgctattaaagacgcagatcaaagatttgcagcatttcttgcccct 972
||||||||||| ||||| || |||||| ||||||| ||||||||||| || || ||||||
Sbjct: 778 ggacaatatctgagtgcaataaaagacccagatcagagatttgcagcgttcctggcccct 837
Query: 973 ctgacatctggtcgtgtaaccattgctgttagtgcaatttactcatcaaagataggtcta 1032
|||| |||||||||||||| ||||||||||||||||| ||||||||||||||| || ||
Sbjct: 838 ttgacttctggtcgtgtaactattgctgttagtgcaatctactcatcaaagataagttta 897
Query: 1033 gcaactgccataaggtattcattatctaggcaggcattttctgttacaccgaatggacct 1092
|||| |||||||||||| || || |||||| ||||||||| | | ||| |||| ||||
Sbjct: 898 gcaattgccataaggtactccttgactaggcgagcattttctatcagacctaatgaacct 957
Query: 1093 gaagtcctattacttgattatccgagtcaccaacgacgactcttgccccttcttgcaaag 1152
||||| ||||| |||||||| || ||||| ||||||||||||||||| ||||||||||||
Sbjct: 958 gaagtgctattgcttgattacccaagtcatcaacgacgactcttgcctcttcttgcaaag 1017
Query: 1153 acatatgctatgagctttgctggaaattatttgaaaatgatatactggaataggacgcca 1212
|||||||||||||| ||||||||||||| |||||||||||||||||||| || | |||
Sbjct: 1018 acatatgctatgagttttgctggaaattccttgaaaatgatatactggaagagagcacca 1077
Query: 1213 gaaacaaataaaacccttcatgttgtttcaagtgcattcaaggctaccttgacctggcat 1272
|| ||||| ||||||||||||||| ||||||||||||||||||||||| |||| ||||||
Sbjct: 1078 gagacaaacaaaacccttcatgttatttcaagtgcattcaaggctaccatgacttggcat 1137
Query: 1273 gatatgagaacacttcaagaatgccgtgaagcttgtggaggacaaggcttgaagactgag 1332
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 1138 aatatgagaacacttcaagaatgccgtgaagcttgcggaggacaaggcttgaagactgaa 1197
Query: 1333 aatcgagttggtcatttgaagagtgaatttgatgttcagtccacctttgagggggacaat 1392
|||||||||||| ||||||| |||||||||||||||||| | || ||||||||||||||
Sbjct: 1198 aatcgagttggtaatttgaaaagtgaatttgatgttcagactacttttgagggggacaac 1257
Query: 1393 aatgttctcatgcagcaggt 1412
|||||||||||||| |||||
Sbjct: 1258 aatgttctcatgcaacaggt 1277
Score = 143 bits (72), Expect = 3e-33
Identities = 241/296 (81%), Gaps = 1/296 (0%)
Strand = Plus / Plus
Query: 184 atgcacaatatcgatgacagggattggttgtttgggttaatgaggcagagcaaggtgttt 243
||||| ||||| || || || |||||||| |||||||||||||| |||||||||||||||
Sbjct: 19 atgcataatatagaagatagagattggttatttgggttaatgagacagagcaaggtgttt 78
Query: 244 aatccgcgagagaagggagggagagtgtatgtggcgccggattataaccagtccatggaa 303
||||| ||| || |||||||||||||||| | ||| |||||||| || || | ||||
Sbjct: 79 aatcccgtagaaaaaggagggagagtgtatgcagtgcctgattataatcaatcaacggaa 138
Query: 304 cagcagagagaaataacgatgagacgggtggcgtatctattggaaagaggggtttttgat 363
||||| |||||||| || |||| ||| | | ||| | | |||||||| |||||| ||
Sbjct: 139 cagcaaagagaaatgactatgaaacgaattggatatatgctagaaagaggtgtttttaat 198
Query: 364 ggttggttaacagggaaaggtcttgaatcggaaatgaaaaa-atggccttgtttgaagtt 422
|| ||||| ||||||||||| | ||||||||||||||||| | ||||| | ||||||
Sbjct: 199 gggtggttgacagggaaaggattagaatcggaaatgaaaaagtttgcctttctggaagtt 258
Query: 423 attggcatgtttgatcactccctcgctattaaactcggtgttcacttctttttatg 478
| ||| || |||||||| || ||| || |||| || ||||||||||||||||||||
Sbjct: 259 actgggatttttgatcattctctctctgttaagcttggtgttcacttctttttatg 314