Jatropha Genome Database
- JcCA0149621.20
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0149621.20 - phase: 2 /partial
(859 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30027.m000845 Ubiquitin carboxyl-terminal hydrolase, putative 593 e-169
>30027.m000845 Ubiquitin carboxyl-terminal hydrolase, putative
Length = 2376
Score = 593 bits (299), Expect = e-169
Identities = 658/778 (84%), Gaps = 6/778 (0%)
Strand = Plus / Plus
Query: 79 gactgctggtctaacttcattccctgattatttggtgttgcacatgcgtaaatttgtcat 138
|||||||||| |||||||||||||||| ||| |||| || |||||||| |||||||| ||
Sbjct: 1599 gactgctggtttaacttcattccctgaatatctggtattacacatgcggaaatttgttat 1658
Query: 139 ggaggagggctgggtgccgaaaaagcttgacgtctatatagatgttcctgatatcataga 198
|||||| || |||||||| ||||||||||| ||||||||||||||||||||| |||||||
Sbjct: 1659 ggaggaaggatgggtgcctaaaaagcttgatgtctatatagatgttcctgatgtcataga 1718
Query: 199 tatcagtcacatgcgaagcaggggccttcaaccaggagagcagttgttgccagagggtga 258
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 1719 tatcagtcacatgcgaagcaggggccttcaaccaggggagcagttgttgccagagggtgt 1778
Query: 259 ccctagtgatgaggtagaatcaaagcagcttgtggccaatgaggatattgtttcccagct 318
|| | | |||||| ||| |||| || ||||||| |||||||||||||| | ||||||
Sbjct: 1779 ttctgggggtgaggtggaagcaaataagattgtggctaatgaggatattgtcttccagct 1838
Query: 319 tgtctcaatgggattcaactatcttcactgtcagaaagctgctataaataccttgaacac 378
| ||| ||||| |||||| ||||| | |||||||||||||||||||||||||| |||||
Sbjct: 1839 tcgctcgatggggttcaaccatctttattgtcagaaagctgctataaatacctttaacac 1898
Query: 379 tggagtagaagaggcaatgaattggttactttctcacatggatgatccagatatagatgt 438
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 1899 tggagtagaagaggcaatgaattggttactttctcacatggatgatccagacatagatgc 1958
Query: 439 tccgatttctcaaggggtactaggtactgaagttgttgaccaatcgaaagttgatacttt 498
||| |||||||||| | || ||||| | ||||| ||||| ||| ||||||||||
Sbjct: 1959 tcctatttctcaagag------gggactgagatcgttgatcaatccaaaattgatacttt 2012
Query: 499 gatttcgtttggctttcaagaagaattagctcggaaagcgctaaaggcatcgggtgggga 558
||| || || || |||||||| || | ||||| ||||| || ||||| |||| ||| ||
Sbjct: 2013 gatctcattcggatttcaagaggagattgctcgaaaagcactcaaggcgtcggatggtga 2072
Query: 559 cattgagaaagcaacagattggatattcagcaatcccgatgcttctgtctcatctgatat 618
||||||||||||||||||||||||||||| |||||| |||||||||| |||||||||||
Sbjct: 2073 cattgagaaagcaacagattggatattcaacaatcctgatgcttctgcttcatctgatat 2132
Query: 619 ggatgccaccacatctagtaacttacctaacccggatgatgctggactgcctgatggagg 678
||||||||| || | || | | ||| | | |||||| | | ||| |||||||||||
Sbjct: 2133 ggatgccactactccaagcaccacgtctaccgcagatgataccgtacttcctgatggagg 2192
Query: 679 agggagatacaggcttttcggaatagtgagccacattggaacctctacgcaatgcgggca 738
||||||||||| |||||||||||||||||| || || ||||||||||| || || || ||
Sbjct: 2193 agggagatacaagcttttcggaatagtgagtcatatgggaacctctactcagtgtggtca 2252
Query: 739 ttatgttgcgcatgtatttaaagatggcagatggactattttcaacgacaacaaggtcgg 798
||||||||| ||| | |||||| ||| | |||| |||||||| || | ||||| ||
Sbjct: 2253 ttatgttgctcatatccttaaaggtgggaaatgggtaattttcaatgatgataaggttgg 2312
Query: 799 ggcttctgtaaaccctcccaaagatatggggtatctatacttttttgaaaggcttgac 856
|| |||||||||||| || || || ||||| ||| | || |||||||| |||||||||
Sbjct: 2313 ggtttctgtaaacccgccgaaggacatgggatatttgtatttttttgagaggcttgac 2370