Jatropha Genome Database
- JcCA0149281.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0149281.10 + phase: 0
(2658 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
27553.m000320 spliceosomal protein sap, putative 842 0.0
>27553.m000320 spliceosomal protein sap, putative
Length = 3663
Score = 842 bits (425), Expect = 0.0
Identities = 900/1057 (85%), Gaps = 6/1057 (0%)
Strand = Plus / Plus
Query: 643 ctaaatgaacttctgttattggaatggaacattggagaacatgctataaatgtcatttcg 702
||||| |||||||| || |||||||||||||| ||| |||| |||||||||| || |
Sbjct: 736 ctaaacgaacttcttttgttggaatggaacatcagaggacatactataaatgttatccca 795
Query: 703 ttgtatgttgaagctggaccaattgcacatgacatcattgaagttcctcattctaatgga 762
|||||||||| |||||||| |||||||||| | |||||||||||||||||||||
Sbjct: 796 a---atgttgaagcaggaccaat---acatgacatcgtcgaagttcctcattctaatgga 849
Query: 763 tttgcatttctgttcagggttggtgatgctctcttaatggatcttagagatgctcacaac 822
|||||||||||||| |||||||| |||||||||||||||||||| |||||||||||| ||
Sbjct: 850 tttgcatttctgtttagggttggcgatgctctcttaatggatctaagagatgctcaccac 909
Query: 823 ccctgctgtatctatagaacaagcttaaatttcttgcccactgcagtggaggagcagaat 882
|||||| || ||| || || ||||| | ||||||||| ||||| |||||||||| |||
Sbjct: 910 ccctgccgtgtctgtaagacgagcttcagtttcttgcctgctgcaatggaggagcaaaat 969
Query: 883 tttgtggaagagtcatgtagagttcatgatgttgatgatgatggtttgttcaatgttgct 942
||||| ||||| || ||| ||||||||||||||||||||||| |||||||||||||||||
Sbjct: 970 tttgttgaagattcgtgtcgagttcatgatgttgatgatgatagtttgttcaatgttgct 1029
Query: 943 gcatgtgctttactggagcttcgagattatgaccctatgtgtatagacagtgaaggcagt 1002
||||||||||||||| |||||| |||||||| || ||||||||||| |||||||| ||
Sbjct: 1030 gcatgtgctttactgcagcttcaggattatgatccaatgtgtatagatagtgaaggtggt 1089
Query: 1003 aatataaaatcaacctcaaattacatgtgctcttggagttggggaccagaaagtgataaa 1062
| | |||||||||||||||| || | |||||||||||||||| |||||| |||||||
Sbjct: 1090 agtgtaaaatcaacctcaaagtatgtctgctcttggagttgggaaccagagcctgataaa 1149
Query: 1063 aatccaaggatgatattttgtatagatacaggagaatttttcatgattgaaatatctttt 1122
||||||| ||||| ||||||||||| |||||||| |||||||||||||||||||||||
Sbjct: 1150 aatccaaaaatgattttttgtatagacacaggagagtttttcatgattgaaatatctttc 1209
Query: 1123 gattcagaggggcttaaggttaacctttctgattgtctgtataagggtcaaccatgcaag 1182
|||||||||| |||| ||||| |||||||||||| | || || |||| |||| | ||
Sbjct: 1210 gattcagaggaccttagagttaatctttctgattgtgtctacaaaggtctaccaagtaaa 1269
Query: 1183 tcacttttgtgggttgaaagtggcttcctggctgctattgtagagatgggagatgggatt 1242
|| ||||||||||||||| |||| |||||||| ||| |||| |||||||| ||||| |||
Sbjct: 1270 tcgcttttgtgggttgaaggtggtttcctggccgctcttgttgagatgggggatggcatt 1329
Query: 1243 gttctgaaagtggaagatggaaggctactatataccagccccattcaaaatattgcaccg 1302
|| ||||| |||||| ||| |||||| |||| | ||||| || ||||||||||||||
Sbjct: 1330 gtcctgaaggtggaaaatgacaggctaagatatgcaagccctatacaaaatattgcacca 1389
Query: 1303 atcttggatatgttagttgtggattgccatgatgagaaacgtgatcaaatgtttgcctgt 1362
|||||||| |||| |||||||||| |||||| ||||||| || |||||||||| |||
Sbjct: 1390 atcttggacatgtcagttgtggatcaccatgacgagaaacaggagcaaatgtttggctgc 1449
Query: 1363 tgtggggtggctccagaaggctcattaaggattattaggactggcataagtgtcgaaaag 1422
||||| ||||| || ||||| ||||||||||||||||| | |||||| ||||| ||||||
Sbjct: 1450 tgtggagtggcccctgaagggtcattaaggattattagaagtggcatcagtgttgaaaag 1509
Query: 1423 cttgtgaagactgcatctatttatcaaggcattactggtacctggacacttcgaatgaaa 1482
| ||| ||||||| |||||||||| ||| |||||||||||||| ||||| ||||||||
Sbjct: 1510 ttattgaggactgcacctatttatcagggcgttactggtacctgggcacttagaatgaaa 1569
Query: 1483 ttgaacgacctttatcattcttttcttgtgatatcttttgttgaagagaccagggtgcta 1542
| | |||| | |||||||||||| |||| ||||||||||||||||||||||||| |||
Sbjct: 1570 gtaaccgacttgtatcattcttttgttgtactatcttttgttgaagagaccagggttcta 1629
Query: 1543 tcagttggggtaagctttactgatgtgactgattcggttggctttcagcctgacgtatgt 1602
|||||||| ||||||||| ||||||| |||||||| | |||||| | || | || |||
Sbjct: 1630 tcagttggagtaagctttgctgatgttactgattcagctggcttccttcccaatgtctgt 1689
Query: 1603 actttagcgtgtggacttgtaggtgatggtttgcttgtccaaattcatcaaactgctgtt 1662
||||| || || ||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 1690 actttggcttgcggacttgtaggtgatggtttgcttgtccaaattcaccaaactgctgtt 1749
Query: 1663 cagctttgtttgcccaccaagattgcgcatgctgaag 1699
| ||||||||||| ||| || |||| ||||||||||
Sbjct: 1750 cgcctttgtttgcctacccaggttgctcatgctgaag 1786
Score = 295 bits (149), Expect = 7e-79
Identities = 460/564 (81%), Gaps = 6/564 (1%)
Strand = Plus / Plus
Query: 2076 agttcttgcttgtgggacaatttcattaacaaatactctgggaactgctgttagtggttg 2135
|||||||||| | |||||||| || |||||||||||||| ||||||||| | ||||||||
Sbjct: 1824 agttcttgctcgggggacaatatctttaacaaatactctaggaactgctatcagtggttg 1883
Query: 2136 catccctcaagatgtaaggcttgtactggttgatcggtcttatgttctttctggtttgag 2195
|||||||||||||||||||||||||||||||||||| || |||||||||||||| ||
Sbjct: 1884 tgtccctcaagatgtaaggcttgtactggttgatcggttgtacgttctttctggtttaag 1943
Query: 2196 gaatggaatgctgcttcggtttgagtggcccccagcctcttcc------atgtcatcatt 2249
|||||| ||||||||||||||||||||||| | ||||||| || || || |
Sbjct: 1944 gaatggcatgctgcttcggtttgagtggccttcttcctcttcatcttcaatttcttcgat 2003
Query: 2250 agaatttccgcactatggatgtcctattgattcctgtatggttaatgttggtggtgcttt 2309
||| | || ||||||||| |||||||||||| |||||| |||| | || ||| |||
Sbjct: 2004 ggaaataccatactatggatatcctattgattcatgtatgacaaatgcttgtagtggttt 2063
Query: 2310 atcaaatatgtctgcgatgtcttttgagcctcaaacatgtgctgttgaattaaggagcaa 2369
||||| || |||| ||| | |||| | ||||||||| ||||||| |||| ||
Sbjct: 2064 atcaactacaactgcagtgtttcctgagtcacaaacatgttctgttgacttaaccggcgg 2123
Query: 2370 ggcaatggatgaacttcctgttaatttacagttgatttccacccgtcgtattggcattac 2429
|||||||||| | ||| ||||| |||| ||||| |||||||||||||||| ||||
Sbjct: 2124 cgcaatggatgggccccctattaatctacaactgattgccacccgtcgtattggtgttac 2183
Query: 2430 ccctgttttccttgttcctctgagtgattcccttgacgcagacatgattgcgctcagtga 2489
||||| || ||||||||||||| |||||| ||||| |||||||||||||| || |||||
Sbjct: 2184 tcctgtatttcttgttcctctgactgattcgcttgatgcagacatgattgcccttagtga 2243
Query: 2490 tagaccatggttattgcaaactgcaaagcacagtctctcttattcatcaatttcatttca 2549
|||||||||||| ||||||||||||| ||| | |||||||| | || || ||||||||
Sbjct: 2244 tagaccatggttgttgcaaactgcaaggcatgggctctcttacacgtcgatctcatttca 2303
Query: 2550 gccttcaactcatgcaacacctgtatgctcagctgaatgcccaaaggggatcttatttgt 2609
||| ||||||||| | || ||||||||||||| ||||||||||| || | |||||||
Sbjct: 2304 gccctcaactcattccactcctgtatgctcagtggaatgcccaaaaggacttctatttgt 2363
Query: 2610 tgcagaaaacagtctacatttggt 2633
||||||||| ||||| ||||||||
Sbjct: 2364 tgcagaaaatagtcttcatttggt 2387
Score = 272 bits (137), Expect = 1e-71
Identities = 418/512 (81%), Gaps = 6/512 (1%)
Strand = Plus / Plus
Query: 13 gaggaggagtgctcgaatgccaagtcccgatcatcgtctccttctgcaacattaaatggc 72
|||||||| ||||||||||| ||||| |||||||||||||| |||||| ||| |||| |
Sbjct: 13 gaggaggaatgctcgaatgcaaagtctcgatcatcgtctccatctgcatcatcaaatagt 72
Query: 73 acgcactacctggccaagtgtgttcttcgaggaagcgctgttcttcaggtcgtgtatggt 132
| |||||| ||||||||||||||||| |||| || | || ||||||||||||||||||
Sbjct: 73 gctcactacttggccaagtgtgttcttagagggagtgtggtacttcaggtcgtgtatggt 132
Query: 133 cacttccgttcgtcttcatccaacgacatcatatttggcaaagagacatctgtagagttg 192
|| || || || |||| || ||||||||| | || ||||| |||||||| |||| |||
Sbjct: 133 cattttcgctctccttcctcaaacgacatcgttttcggcaaggagacatcaatagaattg 192
Query: 193 gtaataattggcgaagagggaattgtagagtctgtttgtgagcagcccatatttggcact 252
|| |||||||| ||||| |||||| || ||||| | ||||||||||| |||||||||||
Sbjct: 193 gtgataattggggaagatggaattctacagtctatatgtgagcagcctgtatttggcact 252
Query: 253 attaaggatcttgctgttatcccttcgaatggaaaattacatgcacgaagccc------g 306
||||| ||||||||||| || |||| ||||| ||| || |||||||||| |
Sbjct: 253 attaaagatcttgctgtcataccttggaatgaaaagttctgcacacgaagcccacagatg 312
Query: 307 caggaaaaagacctcttggctgttgtttctgattctgggaagctatcctttctcacgttt 366
|| | ||| ||||| || |||||| ||| |||||||||||||| || ||||| | |||
Sbjct: 313 catggaaaggaccttttagctgttacttcagattctgggaagctctcatttctaatattt 372
Query: 367 tgcaatgaaatgctcaggttttttccattgacgcaagtgcaactttctagtcctggaaac 426
||||||||||||| ||||||||| || || || || | |||||||| | | ||||||||
Sbjct: 373 tgcaatgaaatgcacaggtttttccctttaacacacattcaactttccaattctggaaac 432
Query: 427 tcaaggcatcaactaggaagaatgctggctgttgattccagtggctgctttattgctagc 486
|| | | |||||||||||| |||||||||||||| |||||||||||||||||||||
Sbjct: 433 tcgatacgtcaactaggaaggctgctggctgttgataccagtggctgctttattgctact 492
Query: 487 agtgcatatgtggaccaattggctttgttctc 518
||||||||||| |||| |||||||| |||||
Sbjct: 493 agtgcatatgttgaccgcttggctttattctc 524
Score = 73.8 bits (37), Expect = 5e-12
Identities = 52/57 (91%)
Strand = Plus / Plus
Query: 574 tatatctggtacaatatggagcatgtgctttatttcaagggattcttgtcaatcaag 630
|||||||||||| ||||||||||| ||||||||||||||||||| ||||||||||
Sbjct: 627 tatatctggtaccatatggagcatttgctttatttcaagggatttaagtcaatcaag 683