Jatropha Genome Database
- JcCA0148831.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0148831.10 + phase: 0
(867 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
28745.m000035 succinate dehydrogenase, putative 293 9e-79
>28745.m000035 succinate dehydrogenase, putative
Length = 942
Score = 293 bits (148), Expect = 9e-79
Identities = 364/436 (83%)
Strand = Plus / Plus
Query: 158 aaaactttccagtactagaagggcatcctgcaggacaagaacatgctcaagaatctatcg 217
|||| |||||| ||||| |||| ||||||| |||||| | |||||||||||||| |||
Sbjct: 92 aaaattttccaatactaaaaggccatcctgtcggacaacagcatgctcaagaatcagtcg 151
Query: 218 aaacatatgacacaatcaaaaccaacatcaagagacttattaaggagttcaagatttata 277
||||||||| ||| || || ||||||||||| ||||| || ||||||| | ||||||
Sbjct: 152 aaacatatggcactgtccaagacaacatcaagaagcttatcaaagagttcagggtttata 211
Query: 278 gatggaatcctgacatccccaacagaaaaccctttctccaatcctattatatagacctct 337
|||||| ||||||| ||||||| |||||||||||||| || || | ||||||||||
Sbjct: 212 gatggagccctgacaatcccaacaacaaaccctttctccagtcttacttcatagacctct 271
Query: 338 ccacctgtgggcctatggttttggatgtattacaaaagataaaggcagaagatgattcaa 397
||| ||| || || ||||||||||||| |||||| ||||| || ||||| |||||||| |
Sbjct: 272 ccagctgcggccccatggttttggatgcattacagaagattaaagcagaggatgattcga 331
Query: 398 gcttgagctatagaagatcatgcagggaagggatatgtgggtcttgtgcaatgaacattg 457
||||||||||||| || |||||||||||||| ||||||||||| ||| | ||||| || |
Sbjct: 332 gcttgagctataggaggtcatgcagggaaggaatatgtgggtcgtgttcgatgaatatcg 391
Query: 458 atgggaccaatacagtggcttgtcttaagcctattgatgctgacactacgaagcccacta 517
||||||| || || || ||||| ||||| || ||||||||||||||| | | ||||||||
Sbjct: 392 atgggactaacactgttgcttgccttaaacccattgatgctgacacttccaggcccacta 451
Query: 518 ttattactcctcttccacacatgtttgtcattaaagaccttgttgtggatctaaccaatt 577
| || |||||||| ||||| |||| |||||||||||| |||||||| ||||| || ||||
Sbjct: 452 tcatcactcctctgccacatatgtatgtcattaaagatcttgttgttgatctcacaaatt 511
Query: 578 tctacaaccagtacag 593
||||||| || |||||
Sbjct: 512 tctacaatcaatacag 527
Score = 163 bits (82), Expect = 2e-39
Identities = 214/258 (82%)
Strand = Plus / Plus
Query: 592 agtgcttcttgcccttcttattggtggagtcctgaagagttccttggacctgcacctttg 651
|||||||| || |||||||||||||||| ||||| || ||||| |||||||| ||||||
Sbjct: 649 agtgcttcatgtccttcttattggtggaaccctgaggaattcctcggacctgctcctttg 708
Query: 652 ctccatgcttacagatggatttctgatagccgggatgaatttacagaggaaaggttgcag 711
|||||||||| ||||||||||||||||||| ||||| || || || |||||| | ||
Sbjct: 709 atccatgcttatcgatggatttctgatagccgtgatgatttcaccgatgaaaggctacaa 768
Query: 712 gcattgacagaggatacaaagaaattatataaatgcaggactattaagaattgtacagca 771
|| ||||||||||| ||| | |||||| | || || || || |||||||| || |||
Sbjct: 769 gctttgacagaggaccaaaaaagattatacaggtgtagaacaatcaagaattgcaccgca 828
Query: 772 tgctgccctaaaagcttaaatccagcagatgccattcacaaaatgaagaccaaacatttg 831
||||| ||||| | |||||||||||||| |||||||||||||||||||| ||| ||
Sbjct: 829 acttgccccaaaagtctcaatccagcagatgcaattcacaaaatgaagaccaagcatctg 888
Query: 832 ctttctcagccagtagag 849
||||||||||||||||||
Sbjct: 889 ctttctcagccagtagag 906