Jatropha Genome Database

JcCA0148271.30
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0148271.30 + phase: 0 
         (411 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

28094.m000179 pentatricopeptide repeat-containing protein, putative    94   8e-19

>28094.m000179 pentatricopeptide repeat-containing protein, putative
          Length = 1662

 Score = 93.7 bits (47), Expect = 8e-19
 Identities = 128/155 (82%)
 Strand = Plus / Plus

                                                                       
Query: 146 tagtagcaaagggtatgttatctcaaaggaagttcatgcagaagagaaggaaagtggaag 205
           |||||||||  || |||||||||| |||||||||  | ||||  |||| |||||| ||||
Sbjct: 125 tagtagcaagaggaatgttatctccaaggaagtttctacagagaagaaagaaagtagaag 184

                                                                       
Query: 206 tgttcaaagacgcagcagatgaagctgaccagaagaattggagaggagtcatgaagcaaa 265
           | || ||||| | ||||||||||||| |||| || |||||||||||| | |||| |||||
Sbjct: 185 tttttaaagatgaagcagatgaagcttaccacaaaaattggagaggattgatgaggcaaa 244

                                              
Query: 266 ttgaagaaactggttctgccgttgcagttcttaaa 300
           |||| ||||| | |||| | ||| |||||||||||
Sbjct: 245 ttgaggaaacagattctcctgtttcagttcttaaa 279