Jatropha Genome Database
- JcCA0147671.20
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0147671.20 + phase: 0
(711 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30189.m001676 Succinyl-CoA ligase [GDP-forming] subunit alpha-2,... 470 e-132
30189.m001675 Succinyl-CoA ligase [GDP-forming] subunit alpha-2,... 448 e-125
>30189.m001676 Succinyl-CoA ligase [GDP-forming] subunit alpha-2,
mitochondrial precursor, putative
Length = 1005
Score = 470 bits (237), Expect = e-132
Identities = 447/517 (86%)
Strand = Plus / Plus
Query: 95 ctcggcaatatgcggcgtctgcgcctcctccgccagcagtatttgttgacaaaaacactc 154
||||||| ||||||||| |||| | ||||| | || ||||||||||| || |||||
Sbjct: 80 ctcggcagtatgcggcggctgcatcgcctccagcggcggtatttgttgataagaacacaa 139
Query: 155 ggctgatatgccaaggtatcactggcaaaaatggcactttccacaccgagcaagcaatcg 214
| ||||||||||||| || |||||||||||||| || || ||||| || || || || |
Sbjct: 140 gagtgatatgccaaggcattactggcaaaaatggtacctttcacactgaacaggccattg 199
Query: 215 aatacggcaccaaaatggtgggaggtgtaacaccaaagaagggagggacagaacacttgg 274
|||| ||||| | |||||||| || |||||||||||||||||||| |||||||||||||
Sbjct: 200 aatatggcactacgatggtgggcggagtaacaccaaagaagggaggaacagaacacttgg 259
Query: 275 gccttcctgttttcaacacagttgcagaagcaaaggctgaaacgaaggctaatgcttcag 334
| ||||||||||||||||||||||| ||||| || |||||||| || ||||||||||| |
Sbjct: 260 ggcttcctgttttcaacacagttgctgaagctaaagctgaaactaaagctaatgcttctg 319
Query: 335 tcatctatgttccgccaccatttgctgcagcagcaattatggaggcaacggaagcagagt 394
|||| ||||| || || || |||||||| || || || |||||||| | |||||| || |
Sbjct: 320 tcatttatgtgcctccgccttttgctgctgcggctatcatggaggctatggaagctgaat 379
Query: 395 tagatctggttgtgtgtattacggagggaatccctcaacatgatatggtacgtgtgaagg 454
| ||||| ||||| || ||||| |||||||| ||||||||||||||||||||||||||||
Sbjct: 380 tggatcttgttgtttgcattactgagggaattcctcaacatgatatggtacgtgtgaagg 439
Query: 455 ctgcgcttaataaacaatccaaaactcggttgattggtccaaactgccctggtattatta 514
|||| ||||| | |||||| ||||||||||||||||| || ||||||||||| ||||| |
Sbjct: 440 ctgctcttaacagacaatctaaaactcggttgattgggccgaactgccctggaattatca 499
Query: 515 agccaggagaatgtaagattggcataatgcctgggtacatccataaacctggtcgcattg 574
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 500 agccaggagaatgtaagattggcataatgcctggttacatccataaacctggtcgcattg 559
Query: 575 gaatcgtttccagatctggtactttgacctatgaagc 611
|||| ||||| |||||||||||||||||||||||||
Sbjct: 560 gaatagtttctcgatctggtactttgacctatgaagc 596
>30189.m001675 Succinyl-CoA ligase [GDP-forming] subunit alpha-2,
mitochondrial precursor, putative
Length = 1005
Score = 448 bits (226), Expect = e-125
Identities = 418/482 (86%)
Strand = Plus / Plus
Query: 133 gtatttgttgacaaaaacactcggctgatatgccaaggtatcactggcaaaaatggcact 192
||||||||||| || ||||| | ||||||| ||||| || |||||||||||||| ||
Sbjct: 118 gtatttgttgataagaacacaggattgatatgtcaaggcattactggcaaaaatggtacc 177
Query: 193 ttccacaccgagcaagcaatcgaatacggcaccaaaatggtgggaggtgtaacaccaaag 252
|| ||||| || || || || ||||| ||||| || |||||||| || ||||||||||||
Sbjct: 178 tttcacactgaacaggctattgaatatggcactaagatggtgggcggagtaacaccaaag 237
Query: 253 aagggagggacagaacacttgggccttcctgttttcaacacagttgcagaagcaaaggct 312
|||||||| |||||||||||||| ||||||||||| ||||||||||| ||||| || |||
Sbjct: 238 aagggaggaacagaacacttgggacttcctgtttttaacacagttgctgaagccaaagct 297
Query: 313 gaaacgaaggctaatgcttcagtcatctatgttccgccaccatttgctgcagcagcaatt 372
||||| || ||||||||||| ||||| || || || || || |||||||| || || ||
Sbjct: 298 gaaactaaagctaatgcttctgtcatttacgtgcccccgccttttgctgctgcggctatc 357
Query: 373 atggaggcaacggaagcagagttagatctggttgtgtgtattacggagggaatccctcaa 432
|||||||| | |||||| || || ||||| ||||| || ||||| |||||||| ||||||
Sbjct: 358 atggaggctatggaagctgaattggatcttgttgtttgcattactgagggaattcctcaa 417
Query: 433 catgatatggtacgtgtgaaggctgcgcttaataaacaatccaaaactcggttgattggt 492
||||| |||||||||||||||||||| ||||| | |||||| |||||||||||||||||
Sbjct: 418 catgacatggtacgtgtgaaggctgctcttaacagacaatctaaaactcggttgattggg 477
Query: 493 ccaaactgccctggtattattaagccaggagaatgtaagattggcataatgcctgggtac 552
|| |||||||| || ||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 478 ccgaactgccccggaattatcaagccaggagaatgtaagattggcataatgcctgggtac 537
Query: 553 atccataaacctggtcgcattggaatcgtttccagatctggtactttgacctatgaagcg 612
|||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||
Sbjct: 538 atccataaacctggtcgcattggaatagtttcgcgatctggtactttgacctatgaagcg 597
Query: 613 gt 614
||
Sbjct: 598 gt 599