Jatropha Genome Database
- JcCA0147561.20
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0147561.20 - phase: 0
(612 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30128.m008717 conserved hypothetical protein 444 e-124
>30128.m008717 conserved hypothetical protein
Length = 615
Score = 444 bits (224), Expect = e-124
Identities = 459/539 (85%), Gaps = 3/539 (0%)
Strand = Plus / Plus
Query: 73 agagatggcgtcgagttcgagattgataagatccctggaagtcatggaggccacgtcaaa 132
||||||||||| ||||||||||||||||||||| | ||||||||||||||| | || |||
Sbjct: 73 agagatggcgttgagttcgagattgataagatcacaggaagtcatggaggcgatgttaaa 132
Query: 133 gctaagggagtaatctatttgtctaatgtacgactggtttttgtcgcacataaacctgtt 192
||||||||| |||||| |||| |||||||| |||||||| | ||| |||||| ||||
Sbjct: 133 gctaagggaacgatctatctgtcgaatgtacgcatggtttttcttgcaaataaacatgtt 192
Query: 193 ggagcctttactgcttttgatatgcctctgctttatattcatggagaaaaattcaaccaa 252
||| ||| | |||||||||||||||| |||||||||| |||||||||||||||| |||
Sbjct: 193 ggaaacttcaatgcttttgatatgcctttgctttatatccatggagaaaaattcagccag 252
Query: 253 ccaatattcttttgcaacaatatttctggtcttgtggagccagtagtcccagaaaatgag 312
||||||||||| ||||||||| |||| ||||||||||| ||||||||||||||||| |||
Sbjct: 253 ccaatattcttctgcaacaatctttccggtcttgtggaaccagtagtcccagaaaacgag 312
Query: 313 aatggtgctctctactccactcactcattcaagattttgttcaaggaagggggttgtgga 372
| | ||||| |||||||||||||| || ||||||||||||||||||||||| ||||||
Sbjct: 313 agcagggctctatactccactcactcgtttaagattttgttcaaggaagggggctgtgga 372
Query: 373 accttcattccaannnnnnncaacttgatctcttcagtgagacaaaataatcaac---ct 429
|||||||||||| ||||||||| |||||||| || ||| | |||| || ||
Sbjct: 373 accttcattccactctttttcaacttgatatcttcagtaaggcaacacaatcgactatct 432
Query: 430 acacctggaatggggcctcagatggatcctttacgagcagctcagactccagttgatgaa 489
| ||||||||| ||||| || ||||||| | |||| | || |||||||||||||||
Sbjct: 433 atctctggaatggaacctcaaattaatcctttgcaagcatcccaaactccagttgatgaa 492
Query: 490 atgatgagacatgcatatgttgatcctaatgatccaacaagaatattcttacagcagccc 549
|||||||||||||||||||| ||||||||||||||||||||||| || || ||||||||
Sbjct: 493 atgatgagacatgcatatgtcgatcctaatgatccaacaagaatctttttgcagcagcct 552
Query: 550 accccagaatctgagttgagaaggcgcacataccagttgtctccagttgaacgctccat 608
|| ||| | || |||||||| |||||||||||||| |||||||||| ||||||||||||
Sbjct: 553 actccacagtccgagttgaggaggcgcacataccacttgtctccagctgaacgctccat 611