Jatropha Genome Database

JcCA0147561.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0147561.10 + phase: 2 /pseudo
         (484 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30128.m008715 catalytic, putative                                     274   5e-73

>30128.m008715 catalytic, putative
          Length = 1281

 Score =  274 bits (138), Expect = 5e-73
 Identities = 384/466 (82%)
 Strand = Plus / Plus

                                                                        
Query: 5    agacttgtctacttcgctgggcgacttcaaaattctcacattcgtcaggagttgataaat 64
            |||||||||||||| ||||| ||  |||||||||||||  |||||| |||| |  |||||
Sbjct: 799  agacttgtctactttgctggacgtgttcaaaattctcaagttcgtcgggagctcgtaaat 858

                                                                        
Query: 65   ttatggggaaatgacactgacatggacatatttgatgggagtccaagtttcccttatgat 124
            |||||||| ||||| ||||| ||||||||| |  |||||||||||  ||||||||| || 
Sbjct: 859  ttatggggtaatgatactgaaatggacataatcaatgggagtccatctttcccttacgag 918

                                                                        
Query: 125  gaaggctttaagaggagccgatattgcctccacgttaaaggctatgaagttaacactgcg 184
            ||||| |||||||||||   |||||| ||||| |||||||| |||||||| |||||||| 
Sbjct: 919  gaaggttttaagaggagtaaatattgtctccatgttaaaggttatgaagtcaacactgcc 978

                                                                        
Query: 185  aggatcagcgatgctattcattacggctgcattcctgttataatttccaataattacgac 244
            ||| |||| ||| |||| ||||| || || |||||||||||||| |||||| | || |||
Sbjct: 979  agggtcagtgattctatacattatggttgtattcctgttataatatccaattactatgac 1038

                                                                        
Query: 245  cttccattcgctaatgtcttggactggagcaagttttcaattatcattcaccatagggat 304
            ||||||||||||| ||||||||||||||||||||||||| |  ||||| ||||    |||
Sbjct: 1039 cttccattcgctactgtcttggactggagcaagttttcagtcgtcattaaccaagcagat 1098

                                                                        
Query: 305  attgccttcttaaaaaagagattgcttgcaataaccacacaaacctacctggacatgtac 364
            ||  ||||||| ||||  | | |||| || |||||   | |||| ||| |   ||||| |
Sbjct: 1099 atccccttcttgaaaacaacactgctggctataacacgaaaaacatacatcaccatgttc 1158

                                                                        
Query: 365  cataatctctgcaaggttaggaggcacttccgatggcacataacaccaaagggctatgat 424
            || ||||||||||  || || || || |||  |||||| |  ||||||||||||||||||
Sbjct: 1159 caaaatctctgcagagtgagaagacatttcgaatggcatactacaccaaagggctatgat 1218

                                                          
Query: 425  tccttttacatgagtgcttaccagttatggcttagaagaagcatcc 470
            ||||||||||||| |||||||||||||||||| |||||||||||||
Sbjct: 1219 tccttttacatgactgcttaccagttatggctaagaagaagcatcc 1264