Jatropha Genome Database

JcCA0147051.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0147051.10 + phase: 1 /partial
         (401 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29780.m001316 ATP binding protein, putative                           244   3e-64

>29780.m001316 ATP binding protein, putative
          Length = 8913

 Score =  244 bits (123), Expect = 3e-64
 Identities = 333/404 (82%), Gaps = 6/404 (1%)
 Strand = Plus / Plus

                                                                        
Query: 3    cttgcacattatcgctcttccattggtaaaagtccttacatagattttgatggggaacaa 62
            ||||| ||||||||  |||||||||| |||||| | |||||| | ||||||| |||||||
Sbjct: 8497 cttgcccattatcgtgcttccattggaaaaagttcctacataaactttgatgaggaacaa 8556

                                                                        
Query: 63   cagttgatgaacaaactgaaggaaactgaggatgacagggtacaaatagcacagaggtta 122
            || || |||||||||||||  ||||||||||| ||||||   | ||||||||||| ||||
Sbjct: 8557 caattaatgaacaaactgatagaaactgaggaggacaggacgcgaatagcacagaagtta 8616

                                                                        
Query: 123  tttggcttgtgtaccagtgttctgaaggtagctggaataacaaaacctgtatccaatgta 182
            || ||||| ||||||||| || |||||| ||| |||||||||||||| ||||||||| ||
Sbjct: 8617 ttgggcttatgtaccagtattttgaaggcagcaggaataacaaaaccagtatccaatata 8676

                                                                        
Query: 183  acccctgctgctgctgaagaggcacttgagcagatgaaaagtaaacttacttcactggaa 242
            | |||||  |  ||||||||||||||||||||||||||||  | | | ||||| || |||
Sbjct: 8677 agccctgtggtggctgaagaggcacttgagcagatgaaaaacagaatcacttcgctagaa 8736

                                                                        
Query: 243  agagaatgccaagatttgacaattaagaacagaattaccactgnnnnnnntcgattgttg 302
            ||||||||||||||||||||  ||||||| |||||||||| ||       ||| ||||  
Sbjct: 8737 agagaatgccaagatttgacgtttaagaatagaattaccaatgaaagaattcggttgtcc 8796

                                                                        
Query: 303  gaggtaatggctcaagcgtcaccagta---aactcaaggatagatgagaactgtcaa--- 356
            ||| ||||| ||||||| || ||  ||   ||||||||||   ||||||||||||||   
Sbjct: 8797 gagttaatgcctcaagcatcgcctttaagcaactcaaggacgaatgagaactgtcaaact 8856

                                                        
Query: 357  actccaaaaaggagtcaaacttcttttctttctgctttagacag 400
            ||||||| |||||| |||| ||||||||||||||||||||||||
Sbjct: 8857 actccaagaaggagccaaagttcttttctttctgctttagacag 8900