Jatropha Genome Database

JcCA0147021.20
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0147021.20 + phase: 0 
         (510 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

29681.m001323 cdc6, putative                                          242   2e-63

>29681.m001323 cdc6, putative
          Length = 1572

 Score =  242 bits (122), Expect = 2e-63
 Identities = 215/246 (87%)
 Strand = Plus / Plus

                                                                       
Query: 257 ataaatcaagttggaatcctagagatatggagcaaataagtgcagtgaaagaggcattgc 316
           ||||| ||| ||||||||||||||||||||||||||| |||||||| |||||||||||||
Sbjct: 245 ataaagcaaattggaatcctagagatatggagcaaatgagtgcagttaaagaggcattgc 304

                                                                       
Query: 317 acgtgtcaactgcaccatctactgtcgtttgccgtgaagatgaacagaaaagggtatttg 376
           | |||||||| |||||||| ||||| || |||||||||||||||||||||| ||| ||||
Sbjct: 305 atgtgtcaacagcaccatcaactgttgtatgccgtgaagatgaacagaaaaaggtttttg 364

                                                                       
Query: 377 aattctgcaaaacatgtatagagcaggaaaaggctgggagtttatatgtttgtggatgtc 436
           | ||||| ||  | ||||| || |||||||||||||||||||||||||| ||||| ||||
Sbjct: 365 atttctgtaaggcttgtattgaacaggaaaaggctgggagtttatatgtgtgtggctgtc 424

                                                                       
Query: 437 ctgggactgggaagtcattgtcaatggagaaggtgaagcaacaattgattgattggtcta 496
           | || ||||| ||||| ||||| |||| ||| ||||||||||| ||| |||||||| | |
Sbjct: 425 caggaactggcaagtctttgtctatggcgaaagtgaagcaacagttggttgattggacca 484

                 
Query: 497 aagagg 502
           ||||||
Sbjct: 485 aagagg 490