Jatropha Genome Database
- JcCA0146411.20
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0146411.20 - phase: 0
(1857 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29708.m000185 ETHYLENE-INSENSITIVE3 protein, putative 1622 0.0
29713.m000181 transcription factor, putative 92 1e-17
30169.m006395 ETHYLENE-INSENSITIVE3 protein, putative 64 3e-09
>29708.m000185 ETHYLENE-INSENSITIVE3 protein, putative
Length = 1854
Score = 1622 bits (818), Expect = 0.0
Identities = 1497/1723 (86%), Gaps = 39/1723 (2%)
Strand = Plus / Plus
Query: 1 atgatgttcgatgagatgggattttgtagtgatatggatttcttctctgcgccttttgga 60
|||||||| |||||||| ||||||||| |||| ||||||||||||||| | || |||||
Sbjct: 4 atgatgtttgatgagattggattttgtggtgacatggatttcttctcttcttctcttgga 63
Query: 61 gaagatgtggctgctccgcaagctgagccggagcctactgtggaggatgattatagtgat 120
|||||||||||||||| ||| ||||||| ||||| || ||||||||||||||| |||
Sbjct: 64 gaagatgtggctgctcagcaggctgagcatgagccgacggtggaggatgattattccgat 123
Query: 121 gaggagactgatgttgatgagcttgagcgcaggatgtggagggacaagatgcgtcttaaa 180
||||||| |||||||||||||||||| || ||||||||||||||||||||||| ||||||
Sbjct: 124 gaggagattgatgttgatgagcttgaacgtaggatgtggagggacaagatgcgacttaaa 183
Query: 181 aggctgaaagagcagaacaagagtaaagaaggtattgatattgctaagcagaggcagtca 240
| ||||||||| ||||| || || || || |||||||| || ||||||||| | || ||
Sbjct: 184 aagctgaaagaacagaataaaagcaaggagggtattgacatggctaagcagcgacaatct 243
Query: 241 caggaacaagctaggaggaagaagatgtcaagggctcaagatgggatcttaaaatatatg 300
|||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 244 caggaacaggctaggaggaagaagatgtcaagggcacaagatgggatcttaaaatatatg 303
Query: 301 ttgaagatgatggaagtttgtaaagctcaaggctttgtttatgggattattcctgagaaa 360
||||||||||||||||||||||| |||||||| |||||||| |||||||||||||||||
Sbjct: 304 ttgaagatgatggaagtttgtaaggctcaaggatttgtttacgggattattcctgagaag 363
Query: 361 ggaaagccagtgactggggcatcagataatcttcgagagtggtggaaggataaagtaagg 420
|| |||||||| ||||||||||| ||||||||||||||||||||||||||||| || |||
Sbjct: 364 gggaagccagttactggggcatctgataatcttcgagagtggtggaaggataaggtcagg 423
Query: 421 tttgatcgaaatggtccggctgccattgccaagtatcaagcggataattcgatcccaggc 480
|||||||| ||||||||||||||||| |||||||| ||||| ||||||||||||||||||
Sbjct: 424 tttgatcggaatggtccggctgccatagccaagtaccaagcagataattcgatcccaggc 483
Query: 481 aagaatgaggattgtaattcaattggtccaactccacataccttgcaggagcttcaagat 540
|||||||||| ||||||||||||||||||||| ||||| || || |||||||||||||||
Sbjct: 484 aagaatgagggttgtaattcaattggtccaaccccacacacattacaggagcttcaagat 543
Query: 541 actactttgggttcgcttttgtcagctttgatgcagcactgtgatcctcctcagaggcgg 600
||||| | |||||||| || ||||| |||||||||||||||||||||||||||||||
Sbjct: 544 actacgctaggttcgctcttatcagcactgatgcagcactgtgatcctcctcagaggcga 603
Query: 601 tttccattggagaaaggtgttcctccaccatggtggcccaatggaaatgaagagtggtgg 660
|||||||| ||||||||||||||||| |||||||||||||| ||||||||||||||||||
Sbjct: 604 tttccattagagaaaggtgttcctccgccatggtggcccaacggaaatgaagagtggtgg 663
Query: 661 cctcaattaggcttacctaaggaccagggtcctccaccttataagaagcctcatgacttg 720
|||||||| |||||||| ||||| ||||| ||||||||||| ||||||||||||||||||
Sbjct: 664 cctcaattgggcttacccaaggatcagggccctccaccttacaagaagcctcatgacttg 723
Query: 721 aaaaaggcatggaaggttggggttcttactgcagtgatcaaacatatgtctccagacatt 780
|| ||||||||||| || ||||||||||||||||| || || ||||||||||| |||||
Sbjct: 724 aagaaggcatggaaagtgggggttcttactgcagtaattaagcatatgtctcctgacatc 783
Query: 781 gccaaaattcgcaagcttgtgagacagtcaaagtgtttacaggacaaaatgacagctaag 840
||||| ||||||||||||||| |||| || ||||| ||||||||||| |||||||| |||
Sbjct: 784 gccaagattcgcaagcttgtgcgacaatccaagtgcttacaggacaagatgacagccaag 843
Query: 841 gagagtgcaacttggcttgcaattattaaccaagaggaggcattggcccgagagctttac 900
|||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 844 gagagtgctacttggcttgcaattatcaaccaagaggaggcattggcccgagagctttat 903
Query: 901 cctgattcatgcccacccttgtcatcgactggagggagtggttcattagtgattcatgat 960
|||||||| |||||||| |||||||| ||||| ||||| || | | |||||||||
Sbjct: 904 cctgattcctgcccacctttgtcatcagctgga---agtggatcgctgatcattcatgat 960
Query: 961 tgcagtgaatatgatgttgaaggggttgaaaatgagccgaactttgatgtgcaagagtgc 1020
|||||||| |||||||||||||| ||||| |||||||||||||||||||||||||||||
Sbjct: 961 tgcagtgagtatgatgttgaaggcattgaagatgagccgaactttgatgtgcaagagtgc 1020
Query: 1021 aaacctgagaatctgaa---ttccaatttgggaatggagagaatgagggaaaggcttcca 1077
|||||||| |||| || ||| |||||||||||||||||||||||||||||| |||
Sbjct: 1021 aaacctgaacatcttaattcttctggtttgggaatggagagaatgagggaaaggctgcca 1080
Query: 1078 cttcgacaaccttcttatccgattaagggagagattgtcactaatgttgattttattagg 1137
||||||||||||||||||||||||||||| || | || | | |||||||||||||||
Sbjct: 1081 cttcgacaaccttcttatccgattaagggtgaattaatctccactgttgattttattaga 1140
Query: 1138 aagagaaaacctcccagtgatatagacatgatggtggatcagaagatatatacatgtgag 1197
||||||||||| | |||||||| |||||||||||||||||||| |||| ||||| |||
Sbjct: 1141 aagagaaaaccatcaagtgatatcaacatgatggtggatcagaaggtatacacatgcgag 1200
Query: 1198 tttgttcaatgtccttacagtcaactccgtcttggttttaatgatagggcttctagggac 1257
||||||||||||||||||||||||||||| ||||||||| |||| ||| |||||||||||
Sbjct: 1201 tttgttcaatgtccttacagtcaactccgccttggttttcatgacaggacttctagggac 1260
Query: 1258 aatcatcaattaaattgcccatataga---tgctctctggactttggaggatcaaatttt 1314
||||||||||||| ||| ||||| ||| | ||| | || ||||| || |||||||||
Sbjct: 1261 aatcatcaattaacttgtccatacagaagttcgtctttagagtttggtgggtcaaatttt 1320
Query: 1315 cactgtaatgaagtgaagcctgttatctttc------------ctcatccaaagccagct 1362
|| |||||||||||||||||||||||||| |||| ||||||||||||
Sbjct: 1321 catgttaatgaagtgaagcctgttatctttccacaaccctgtgctcaaccaaagccagct 1380
Query: 1363 cctctaatggtgaatgcagctccacctactttcgatctatcaggagttccggaagatggg 1422
|| ||||||||| ||||||||| | || ||||| ||||||||||| |||||||||
Sbjct: 1381 gcttcaatggtgaacaatgctccacctgcctttgatctctcaggagttccagaagatggg 1440
Query: 1423 caaaagatgatcagtgaactcatgtcaatctatgacactaacatccaaggaaacaagaat 1482
||||||||||||||||||||||||||||||||||||||||| | ||||| ||||||
Sbjct: 1441 caaaagatgatcagtgaactcatgtcaatctatgacactaatgttcaaggcaacaag--- 1497
Query: 1483 acaaatgctggcaacaatggggtcaatgtcaatgaaagtcacagtcttttccagccaaaa 1542
||| |||||||||| |||| |||| |||| |||||| ||||||||||||||||
Sbjct: 1498 ---aattctggcaacaa-----tcaa-gtcactgaaggtcacaatcttttccagccaaaa 1548
Query: 1543 attcaccatcatcatcaaccggacaactacttccgaggtcaagcgaatgtgatagaggga 1602
|||||| ||||||| ||| ||||||||| || ||||| ||||| || || |
Sbjct: 1549 attcac------catcaacaggataactacttcagaagtcaaagcaatgtaatggacgct 1602
Query: 1603 aatatttttgaagaatccaatattcataataaccatcaaatgttttctcaggatagtaat 1662
||||| ||||| || ||||| || || ||||||||||| |||||||| |||||| ||| |
Sbjct: 1603 aatatctttgaggactccaacatccacaataaccatcagatgttttcacaggatggtagt 1662
Query: 1663 caatttgaaaggtttaaagctttgaattctccatttgagagca 1705
|||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 1663 caatttgacaggtttaaagctttgaattctccatttgagagca 1705
>29713.m000181 transcription factor, putative
Length = 1431
Score = 91.7 bits (46), Expect = 1e-17
Identities = 103/122 (84%)
Strand = Plus / Plus
Query: 256 aggaagaagatgtcaagggctcaagatgggatcttaaaatatatgttgaagatgatggaa 315
||||| ||||||||||||||||||||| || | || || ||| ||||||| ||||||
Sbjct: 181 aggaaaaagatgtcaagggctcaagattccattcttaagtacatggtgaagatcatggaa 240
Query: 316 gtttgtaaagctcaaggctttgtttatgggattattcctgagaaaggaaagccagtgact 375
||||| ||||||||||| || ||||||||||||||| | |||||||| ||||| || |||
Sbjct: 241 gtttgcaaagctcaagggttcgtttatgggattatttcagagaaaggtaagcctgtaact 300
Query: 376 gg 377
||
Sbjct: 301 gg 302
>30169.m006395 ETHYLENE-INSENSITIVE3 protein, putative
Length = 1896
Score = 63.9 bits (32), Expect = 3e-09
Identities = 95/116 (81%)
Strand = Plus / Plus
Query: 256 aggaagaagatgtcaagggctcaagatgggatcttaaaatatatgttgaagatgatggaa 315
|||||||| |||||||| || || ||||| || | ||||| |||||||| | |||||
Sbjct: 283 aggaagaaaatgtcaagagcccaggatggaattctcaaatacatgttgaaactaatggag 342
Query: 316 gtttgtaaagctcaaggctttgtttatgggattattcctgagaaaggaaagccagt 371
||||| ||||| | || ||||| |||||||||||||||||||| || ||||||||
Sbjct: 343 gtttgcaaagcacggggatttgtgtatgggattattcctgagaagggtaagccagt 398
Score = 61.9 bits (31), Expect = 1e-08
Identities = 79/95 (83%)
Strand = Plus / Plus
Query: 566 ctttgatgcagcactgtgatcctcctcagaggcggtttccattggagaaaggtgttcctc 625
||||||||||||||||||| || ||||| ||| || || |||||||||||||| || |
Sbjct: 590 ctttgatgcagcactgtgacccccctcaaaggaagtaccctttggagaaaggtgtcccgc 649
Query: 626 caccatggtggcccaatggaaatgaagagtggtgg 660
| || |||||||| | ||| ||||| |||||||||
Sbjct: 650 cgccttggtggccaactgggaatgaggagtggtgg 684