Jatropha Genome Database
- JcCA0146401.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0146401.10 - phase: 0
(621 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29726.m004096 60S ribosomal protein L19, putative 761 0.0
29986.m001659 60S ribosomal protein L19, putative 434 e-121
>29726.m004096 60S ribosomal protein L19, putative
Length = 621
Score = 761 bits (384), Expect = 0.0
Identities = 551/609 (90%)
Strand = Plus / Plus
Query: 13 aaactacagaagcggctcgccgctagcgttctcaagtgcgggaaaggcaaggtctggctc 72
|||||||||||||||||||||||||| || |||||||| || ||||||||||||||||||
Sbjct: 13 aaactacagaagcggctcgccgctagtgtcctcaagtgtggaaaaggcaaggtctggctc 72
Query: 73 gatcctaatgaggtcaatgaaatttccatggccaattccaggcagaacgttagaaagcta 132
|| |||||||| | ||||||||| || |||||||| || ||||||||| |||| ||||||
Sbjct: 73 gaccctaatgaaggcaatgaaatctctatggccaactcgaggcagaacattaggaagcta 132
Query: 133 gtgaaggatggtttcatcattaggaagccaacaaagattcactctcgttctcgtgcacgc 192
|||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| |||
Sbjct: 133 gtgaaggatggtttcatcatcaggaaaccaacaaagattcactctcgttctcgtgctcgc 192
Query: 193 agaatgaaggaggccaagagaaagggtcgtcactctggatatggtaagcgcaagggtacc 252
|| ||||||||||| |||||||||||||| ||||||||||| |||||||| |||||||||
Sbjct: 193 aggatgaaggaggcaaagagaaagggtcgccactctggatacggtaagcgtaagggtacc 252
Query: 253 agggaggctaggctgccaaccaagatcctttggatgaggagaatgcgtgtcctgaggcgt 312
|||||||||||||||||||| || || || |||||||||||||||||||| || |||||
Sbjct: 253 agggaggctaggctgccaactaaaattctctggatgaggagaatgcgtgttctaaggcgc 312
Query: 313 ctgctgcgcaaatacagggaatccnnnnnnnttgacaagcacatgtatcatgacatgtac 372
|||||||||||||| | ||||| | |||||||||||||||||||||||||||
Sbjct: 313 ctgctgcgcaaatatcgtgaatcaaaaaagatcgacaagcacatgtatcatgacatgtac 372
Query: 373 atgaaggtaaagggtaatgtattcaagaataaacgtgtgctgatggaaagtatccataaa 432
|||||||| ||||||||||| |||||||| |||||||| |||||||||||||||||||||
Sbjct: 373 atgaaggtcaagggtaatgttttcaagaacaaacgtgtcctgatggaaagtatccataaa 432
Query: 433 tcaaaggctgaaaaggcaagagagaagactttatctgaccaatttgaggctaagcgtgca 492
||||||||||||||||||||||||||||| || ||||||||||| ||||||||||||||
Sbjct: 433 tcaaaggctgaaaaggcaagagagaagaccttgtctgaccaattcgaggctaagcgtgct 492
Query: 493 aagaacaaggcaagcagggagaggaagatagccagaagagaggagcgtttggctcagggg 552
||||||||||||||||||||||| ||||| ||||||||||||||||| ||||| |||||
Sbjct: 493 aagaacaaggcaagcagggagagaaagattgccagaagagaggagcgcttggcacaggga 552
Query: 553 cctggagagaaggcaccacaagcacctgccccacagcagaccgagggagcaaagaaatcc 612
||||| |||||||||||||||||||||||||| ||||| || ||||||||||||||||||
Sbjct: 553 cctggggagaaggcaccacaagcacctgcccctcagcatactgagggagcaaagaaatcc 612
Query: 613 aagaagtga 621
||||||||
Sbjct: 613 cagaagtga 621
>29986.m001659 60S ribosomal protein L19, putative
Length = 627
Score = 434 bits (219), Expect = e-121
Identities = 437/512 (85%)
Strand = Plus / Plus
Query: 1 atggtatcgctaaaactacagaagcggctcgccgctagcgttctcaagtgcgggaaaggc 60
||||| ||||| || || || |||||||| ||||| |||||||| || ||||| ||||||
Sbjct: 1 atggtgtcgctgaagctccaaaagcggcttgccgccagcgttctgaaatgcggtaaaggc 60
Query: 61 aaggtctggctcgatcctaatgaggtcaatgaaatttccatggccaattccaggcagaac 120
|| |||||||||||||| ||||| | || ||||| || |||||||| ||| | ||||||
Sbjct: 61 aaagtctggctcgatcccaatgaagctaacgaaatctctatggccaactcccgccagaac 120
Query: 121 gttagaaagctagtgaaggatggtttcatcattaggaagccaacaaagattcactctcgt 180
| || ||||| || ||||||||||||||||| ||||||||||| ||||||||||||||
Sbjct: 121 ataaggaagctggttaaggatggtttcatcatcaggaagccaactaagattcactctcga 180
Query: 181 tctcgtgcacgcagaatgaaggaggccaagagaaagggtcgtcactctggatatggtaag 240
|||||||| ||| | |||||||| ||||||||||| || |||||||||||||||||||||
Sbjct: 181 tctcgtgctcgccgcatgaaggaagccaagagaaaaggacgtcactctggatatggtaag 240
Query: 241 cgcaagggtaccagggaggctaggctgccaaccaagatcctttggatgaggagaatgcgt 300
||||| ||||| || ||||||||||||||||| || || || |||||||| || ||||||
Sbjct: 241 cgcaaaggtacaagagaggctaggctgccaacaaaaattctctggatgagaaggatgcgt 300
Query: 301 gtcctgaggcgtctgctgcgcaaatacagggaatccnnnnnnnttgacaagcacatgtat 360
|| || |||||||| || ||||| |||||||||||| ||||||||||||||||
Sbjct: 301 gttctaaggcgtcttctccgcaagtacagggaatccaagaagattgacaagcacatgtac 360
Query: 361 catgacatgtacatgaaggtaaagggtaatgtattcaagaataaacgtgtgctgatggaa 420
|||||||||||||||||||| ||||||||||| || ||||| || ||||| || ||||||
Sbjct: 361 catgacatgtacatgaaggtgaagggtaatgtctttaagaacaagcgtgttcttatggaa 420
Query: 421 agtatccataaatcaaaggctgaaaaggcaagagagaagactttatctgaccaatttgag 480
||||| || || ||||||||||| || |||||||| |||||| |||||||||||||||||
Sbjct: 421 agtattcacaagtcaaaggctgagaaagcaagagaaaagactctatctgaccaatttgag 480
Query: 481 gctaagcgtgcaaagaacaaggcaagcaggga 512
|||||| | |||||||||||||| || |||||
Sbjct: 481 gctaagagggcaaagaacaaggctagtaggga 512