Jatropha Genome Database
- JcCA0146311.30
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0146311.30 - phase: 0
(1395 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
28093.m000117 Cellulose synthase A catalytic subunit 6 [UDP-form... 1469 0.0
29863.m001055 Cellulose synthase A catalytic subunit 6 [UDP-form... 361 7e-99
30026.m001452 wd40 protein, putative 127 2e-28
29606.m000101 Cellulose synthase A catalytic subunit 6 [UDP-form... 107 2e-22
29637.m000754 Cellulose synthase A catalytic subunit 6 [UDP-form... 105 7e-22
29848.m004649 Cellulose synthase A catalytic subunit 6 [UDP-form... 72 1e-11
29482.m000171 Cellulose synthase A catalytic subunit 3 [UDP-form... 66 6e-10
29761.m000416 Cellulose synthase A catalytic subunit 6 [UDP-form... 64 2e-09
29904.m002970 Cellulose synthase A catalytic subunit 1 [UDP-form... 56 6e-07
>28093.m000117 Cellulose synthase A catalytic subunit 6 [UDP-forming],
putative
Length = 2487
Score = 1469 bits (741), Expect = 0.0
Identities = 1073/1183 (90%), Gaps = 3/1183 (0%)
Strand = Plus / Plus
Query: 213 cagggaggcatcaaagcagatatatgcccttgaaaacattgaaggaatcgaagaatcaac 272
||||||||| |||||||||||| |||| |||||||| ||||||| | ||||||||
Sbjct: 1308 cagggaggcttcaaagcagatacatgctcttgaaaatattgaagaaggaattgaatcaac 1367
Query: 273 cactgaaaaagctgcagaaacatcccaaatgaaattggagaagaagtttgggcagtctcc 332
||||||| || ||||||| ||||| |||||||||||||||||||||| ||||| ||
Sbjct: 1368 ---tgaaaaatcttcagaaactgcccaattgaaattggagaagaagtttggacagtcacc 1424
Query: 333 agtgtttgtggcttccacgcttttagaaaatggtggagttcctcaagatgctagtcctgc 392
||||||||| ||||| | ||| ||||||||||||| |||||||| ||||| ||||||||
Sbjct: 1425 agtgtttgtagcttctgcccttctagaaaatggtggtgttcctcatgatgccagtcctgc 1484
Query: 393 atcacttttgagagaagccatccaggttatcagctgtggttatgaagataaaacggaatg 452
| |||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 1485 agcactgttgagagaagccatccaggttatcagctgtgggtatgaagataaaacggaatg 1544
Query: 453 gggaaaggaagttggctggatatatggctctgtgactgaggatatcctgacaggattcaa 512
|||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||
Sbjct: 1545 gggaaaggaagttggctggatatatggctcagtgactgaggatattctgacaggattcaa 1604
Query: 513 gatgcactgccatggatggcgatctgtgtactgcatacctaagcggcctgcgtttaaggg 572
||||||||||||||||||| | ||||||||||||||||||||||||||||| ||||||||
Sbjct: 1605 gatgcactgccatggatggaggtctgtgtactgcatacctaagcggcctgcatttaaggg 1664
Query: 573 gtcagctcctattaatctgtcagatcgtctacaccaagttcttcgatgggcccttgggtc 632
|||||||||||||||||||||||||||||||||||| ||||| || ||||| ||||||||
Sbjct: 1665 gtcagctcctattaatctgtcagatcgtctacaccaggttctccgttgggcacttgggtc 1724
Query: 633 tgtggaaattttcttgagcagacattgtcctatttggtatggctatgggggtggattgaa 692
||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 1725 tgttgaaattttcttgagcagacattgtcctatttggtatggctatggtggtggattgaa 1784
Query: 693 atggttggaacgattttcctacataaattcagtcgtgtatccttggacatccattccctt 752
|||| | |||||||||||||| ||||| ||||| || |||||||||||||||||||||||
Sbjct: 1785 atggcttgaacgattttcctatataaactcagttgtatatccttggacatccattccctt 1844
Query: 753 gcttgtttactgcactctaccagctatttgccttctcactgggaaattcattgttccaga 812
|||||||||||| || || |||||||| |||||||| ||||| ||||| |||||||| ||
Sbjct: 1845 gcttgtttactgtaccctgccagctatctgccttcttactggaaaatttattgttcctga 1904
Query: 813 gattagtaattatgccagcatcatattcatggctctcttcatatctattgctgctactgg 872
|||||| || |||||||| |||||||||||||| ||||||||||| |||||||| |||||
Sbjct: 1905 gattagcaactatgccagtatcatattcatggcactcttcatatcaattgctgcaactgg 1964
Query: 873 tgtccttgagatgcaatggggtggtgttggtatagacgactggtggagaaatgagcagtt 932
||||||||||||||| |||||||| ||||| ||||| |||||||||||||||||||||||
Sbjct: 1965 tgtccttgagatgcagtggggtggcgttgggatagatgactggtggagaaatgagcagtt 2024
Query: 933 ttgggtgattggaggcgtttcatcacatctttttgctctcttccagggtttgctgaaggt 992
||||||||||||||| || ||||| ||||||||||||||||||||||||||||| |||||
Sbjct: 2025 ttgggtgattggaggtgtctcatctcatctttttgctctcttccagggtttgctcaaggt 2084
Query: 993 gttggctggtgtcaacacaaacttcactgtcacttcaaaagcagccgatgatggagcatt 1052
||||||||| |||| ||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 2085 gttggctggggtcagtacaaacttcactgtcacgtcaaaagcagccgatgatggagcatt 2144
Query: 1053 ttcagagctttatatattcaaatggacatcactcttaatccctcccacaactttattgat 1112
|||||||||||| ||||||| |||||||| | ||||| |||||||||||||| |||||
Sbjct: 2145 ttcagagctttacctattcaagtggacatcgttgttaatacctcccacaactttgttgat 2204
Query: 1113 cataaacatagttggagttgttgttggggtatcagatgctatcaacaatgggtatgattc 1172
||||||||| ||||| ||||| ||||| || || ||||| |||||||| |||||||||||
Sbjct: 2205 cataaacattgttggtgttgtggttggagtctcggatgccatcaacaacgggtatgattc 2264
Query: 1173 atggggtcctttatttggtaggctctttttcgccttatgggtcattattcacctctaccc 1232
|||||||||||| || |||||||| ||||||||||| |||||||||||||| ||||||||
Sbjct: 2265 atggggtcctttgttcggtaggctatttttcgccttctgggtcattattcatctctaccc 2324
Query: 1233 cttcctcaaggggcttcttgggaagcaagaccgcatgcccaccattattctggtatggtc 1292
|||||||||||| || ||||| || ||||| |||||||||||||||||||||||||||||
Sbjct: 2325 cttcctcaagggtctgcttggaaaacaagatcgcatgcccaccattattctggtatggtc 2384
Query: 1293 aattctgctggcttctatcctaactcttatgtgggtccgaataaacccatttgtgtccaa 1352
|||||| |||||||| |||||||||||||| ||||||||| |||||||||||||||| |
Sbjct: 2385 aattctactggcttcaatcctaactcttatatgggtccgagtaaacccatttgtgtctag 2444
Query: 1353 agatggccctgtactggaagtatgtgggttggactgtgactaa 1395
||||||||||||| ||||||||||||| ||| |||||||||||
Sbjct: 2445 agatggccctgtattggaagtatgtggattgaactgtgactaa 2487
Score = 220 bits (111), Expect = 2e-56
Identities = 147/159 (92%)
Strand = Plus / Plus
Query: 1 atgaaagggttagatggtttgcaaggacctatatatgttggaactgggtgtgttttccga 60
|||||||| ||||||||||||||||| || ||||||||||||||||| ||||||||||||
Sbjct: 1096 atgaaaggattagatggtttgcaagggccaatatatgttggaactggttgtgttttccga 1155
Query: 61 agggtagcactttatggttatgatgcacctgtaaagaagaagccccctggcaagacctgc 120
||| ||||||||||||||||||||| ||||| ||||||||| |||||||||||||||||
Sbjct: 1156 aggcaagcactttatggttatgatgctcctgtcaagaagaaggcccctggcaagacctgc 1215
Query: 121 aactgttggccaaaatggtgctgcatgtgctgtggatct 159
||||||||||||||||||||||| | ||||||||||||
Sbjct: 1216 aactgttggccaaaatggtgctgtctatgctgtggatct 1254
>29863.m001055 Cellulose synthase A catalytic subunit 6 [UDP-forming],
putative
Length = 3288
Score = 361 bits (182), Expect = 7e-99
Identities = 566/694 (81%)
Strand = Plus / Plus
Query: 389 ctgcatcacttttgagagaagccatccaggttatcagctgtggttatgaagataaaacgg 448
||||||||||||||| |||||| || || || ||||||||||| |||||||||||| | |
Sbjct: 2282 ctgcatcacttttgaaagaagcaattcatgtcatcagctgtggctatgaagataaatccg 2341
Query: 449 aatggggaaaggaagttggctggatatatggctctgtgactgaggatatcctgacaggat 508
||||||| || || ||||| ||||| ||||| ||||| ||||||||||| ||||||| |
Sbjct: 2342 aatgggggaaagaggttgggtggatttatggttctgtcactgaggatatattgacaggct 2401
Query: 509 tcaagatgcactgccatggatggcgatctgtgtactgcatacctaagcggcctgcgttta 568
|||||||||| |||||||| |||||||| |||||||||||||| | | | ||||||||||
Sbjct: 2402 tcaagatgcattgccatggctggcgatcagtgtactgcataccaaggagacctgcgttta 2461
Query: 569 aggggtcagctcctattaatctgtcagatcgtctacaccaagttcttcgatgggcccttg 628
|||| |||||||| || ||||| ||||||||||| ||||| ||||| |||||||| || |
Sbjct: 2462 agggctcagctccaataaatctttcagatcgtctgcaccaggttctccgatgggcactag 2521
Query: 629 ggtctgtggaaattttcttgagcagacattgtcctatttggtatggctatgggggtggat 688
| ||||| || ||||| ||||| | || ||||| || |||||||| |||||| ||||||
Sbjct: 2522 gatctgttgagattttgttgagtaagcactgtccaatatggtatgggtatgggtgtggat 2581
Query: 689 tgaaatggttggaacgattttcctacataaattcagtcgtgtatccttggacatccattc 748
||||| ||||| || || || || ||||| ||||| || ||||| ||| || ||||
Sbjct: 2582 tgaaaccattggagcgcttctcatatataaactcagttgtttatccactgacctcaattc 2641
Query: 749 ccttgcttgtttactgcactctaccagctatttgccttctcactgggaaattcattgttc 808
||||| | | ||||| || | |||||| |||| || || ||||||||||| ||||| |
Sbjct: 2642 ccttggtcgcatactgtaccttgccagctgtttgtctccttactgggaaatttattgtcc 2701
Query: 809 cagagattagtaattatgccagcatcatattcatggctctcttcatatctattgctgcta 868
| ||| ||| ||||||||| || ||||| |||||||| ||||||||| | || || ||||
Sbjct: 2702 ctgagcttactaattatgcaagtatcattttcatggccctcttcataaccatagcagcta 2761
Query: 869 ctggtgtccttgagatgcaatggggtggtgttggtatagacgactggtggagaaatgagc 928
| | || | || ||||||||||| || || || ||| | |||||||||||||||||||
Sbjct: 2762 caagcatcttagaaatgcaatggggaggggtcgggatacatgactggtggagaaatgagc 2821
Query: 929 agttttgggtgattggaggcgtttcatcacatctttttgctctcttccagggtttgctga 988
|||||||||||||||| ||| ||||| || || |||||||| ||||||||| |||| |
Sbjct: 2822 agttttgggtgattggtggcacgtcatcccacctgtttgctcttttccagggtctgctca 2881
Query: 989 aggtgttggctggtgtcaacacaaacttcactgtcacttcaaaagcagccgatgatggag 1048
|||| || || ||||| | ||| | ||||| || ||||||||||||| ||||||||||
Sbjct: 2882 aggtattagcaggtgttagcaccagtttcacggttacttcaaaagcaggagatgatggag 2941
Query: 1049 cattttcagagctttatatattcaaatggacatc 1082
|||||||||||| || | ||||| ||||||||
Sbjct: 2942 aattttcagagctctacctcttcaagtggacatc 2975
Score = 93.7 bits (47), Expect = 3e-18
Identities = 104/123 (84%)
Strand = Plus / Plus
Query: 22 caaggacctatatatgttggaactgggtgtgttttccgaagggtagcactttatggttat 81
|||||||||||||||||||| || |||||||| ||| ||||| || || ||||| |||
Sbjct: 1888 caaggacctatatatgttggtacagggtgtgtcttcagaaggcaggcgctgtatgggtat 1947
Query: 82 gatgcacctgtaaagaagaagccccctggcaagacctgcaactgttggccaaaatggtgc 141
||||| || | ||||||||||| || |||||||| || ||||| |||||||||||||||
Sbjct: 1948 gatgcccccatcaagaagaagccaccaggcaagacatgtaactgctggccaaaatggtgc 2007
Query: 142 tgc 144
|||
Sbjct: 2008 tgc 2010
>30026.m001452 wd40 protein, putative
Length = 4377
Score = 127 bits (64), Expect = 2e-28
Identities = 202/248 (81%)
Strand = Plus / Plus
Query: 433 tatgaagataaaacggaatggggaaaggaagttggctggatatatggctctgtgactgag 492
|||||||| ||||| ||||||||||| || |||| ||||||||||| || || || |||
Sbjct: 3406 tatgaagagaaaactgaatggggaaaagagattggttggatatatggttcagtcacggag 3465
Query: 493 gatatcctgacaggattcaagatgcactgccatggatggcgatctgtgtactgcatacct 552
|||||| ||| || |||||||||||||||| ||||||||||| | |||||||| ||
Sbjct: 3466 gatatcttgagtggcttcaagatgcactgccgaggatggcgatcaatttactgcatgccc 3525
Query: 553 aagcggcctgcgtttaaggggtcagctcctattaatctgtcagatcgtctacaccaagtt 612
||||||| || || ||||| || || || |||||||| ||| | | || || |||
Sbjct: 3526 gtaaggcctgcattcaaagggtctgcacccatcaatctgtctgatagattgcatcaggtt 3585
Query: 613 cttcgatgggcccttgggtctgtggaaattttcttgagcagacattgtcctatttggtat 672
|| || ||||| |||||||||||||||||||||||||||||||| |||||| | ||||||
Sbjct: 3586 ctccggtgggctcttgggtctgtggaaattttcttgagcagacactgtcctctctggtat 3645
Query: 673 ggctatgg 680
|| |||||
Sbjct: 3646 gggtatgg 3653
>29606.m000101 Cellulose synthase A catalytic subunit 6 [UDP-forming],
putative
Length = 3258
Score = 107 bits (54), Expect = 2e-22
Identities = 185/226 (81%), Gaps = 2/226 (0%)
Strand = Plus / Plus
Query: 418 gttatcagctgtggttatgaagataaaacggaatggggaaaggaagttggctggatatat 477
|||||||||||||| || || || |||||||| ||||||| || |||| ||||| |||
Sbjct: 2278 gttatcagctgtgggtacgaggacaaaacggactggggaagtgagattggatggatctat 2337
Query: 478 ggctctgtgactgaggatatcctgacaggattcaagatgcactgc-catggatggcgatc 536
|| ||||| ||||| ||||| || || |||||||||||||| ||| | ||| ||||| ||
Sbjct: 2338 ggttctgttactgaagatattcttactggattcaagatgca-tgctcgtggttggcggtc 2396
Query: 537 tgtgtactgcatacctaagcggcctgcgtttaaggggtcagctcctattaatctgtcaga 596
| |||||||| |||||||| || || ||||| ||||| |||||||| ||||| || ||
Sbjct: 2397 aatttactgcatgcctaagcgtccagcctttaaagggtctgctcctatcaatctttctga 2456
Query: 597 tcgtctacaccaagttcttcgatgggcccttgggtctgtggaaatt 642
|||||| | ||||||||||||||||| | || ||||||||||||
Sbjct: 2457 tcgtctgaatcaagttcttcgatgggctttaggttctgtggaaatt 2502
Score = 52.0 bits (26), Expect = 9e-06
Identities = 56/66 (84%)
Strand = Plus / Plus
Query: 888 atggggtggtgttggtatagacgactggtggagaaatgagcagttttgggtgattggagg 947
|||| |||||||||| || || || ||||||||||| || ||||||||||| ||||| ||
Sbjct: 2748 atggagtggtgttggaatcgatgagtggtggagaaacgaacagttttgggttattggtgg 2807
Query: 948 cgtttc 953
|||||
Sbjct: 2808 tgtttc 2813
>29637.m000754 Cellulose synthase A catalytic subunit 6 [UDP-forming],
putative
Length = 3135
Score = 105 bits (53), Expect = 7e-22
Identities = 107/125 (85%)
Strand = Plus / Plus
Query: 1117 aacatagttggagttgttgttggggtatcagatgctatcaacaatgggtatgattcatgg 1176
||||| ||||| ||||| | ||| ||||| |||||||||||||||||||||| |||||||
Sbjct: 2857 aacatggttggggttgtggctggagtatctgatgctatcaacaatgggtatggttcatgg 2916
Query: 1177 ggtcctttatttggtaggctctttttcgccttatgggtcattattcacctctaccccttc 1236
||||||||||| || | ||| || ||||| || |||||||| |||| |||||||| |||
Sbjct: 2917 ggtcctttattcggaaagctattcttcgctttctgggtcatcgttcatctctaccctttc 2976
Query: 1237 ctcaa 1241
|||||
Sbjct: 2977 ctcaa 2981
Score = 91.7 bits (46), Expect = 1e-17
Identities = 310/398 (77%)
Strand = Plus / Plus
Query: 406 gaagccatccaggttatcagctgtggttatgaagataaaacggaatggggaaaggaagtt 465
||||| ||||| ||||| || ||||| |||||||| || || ||||||||||| || |||
Sbjct: 2146 gaagctatccatgttattagttgtggatatgaagagaagactgaatggggaaaagaggtt 2205
Query: 466 ggctggatatatggctctgtgactgaggatatcctgacaggattcaagatgcactgccat 525
|| ||||| ||||| || | || ||||||||||||||||||||||||||||| ||
Sbjct: 2206 ggatggatctatggttcaattacagaggatatcctgacaggattcaagatgcattgtaga 2265
Query: 526 ggatggcgatctgtgtactgcatacctaagcggcctgcgtttaaggggtcagctcctatt 585
|||||| || | || || || ||| |||| |||||||| |||||||| |||
Sbjct: 2266 ggatggaagtcaatttattgttctccaaagattgctgcttttaagggatcagctcccatt 2325
Query: 586 aatctgtcagatcgtctacaccaagttcttcgatgggcccttgggtctgtggaaattttc 645
||||| || ||||| | ||||||||||| |||||||| ||||| ||||| |||||||||
Sbjct: 2326 aatctatctgatcggttgcaccaagttctccgatgggctcttggttctgttgaaattttc 2385
Query: 646 ttgagcagacattgtcctatttggtatggctatgggggtggattgaaatggttggaacga 705
|||| | || || || | |||||||| ||||| || ||||||||| |||| |
Sbjct: 2386 atgagtcgtcactgcccattatggtatggttatggaggaaagttgaaatggctggagagg 2445
Query: 706 ttttcctacataaattcagtcgtgtatccttggacatccattcccttgcttgtttactgc 765
|| ||||||| ||| | || || ||||||| || |||||||| ||||||| ||||||
Sbjct: 2446 cttgcctacattaatactgttgtctatcctttcacttccattcctttgcttgcttactgt 2505
Query: 766 actctaccagctatttgccttctcactgggaaattcat 803
||||| |||||| | |||||||| || || ||||||||
Sbjct: 2506 actcttccagctgtctgccttctgacaggaaaattcat 2543
>29848.m004649 Cellulose synthase A catalytic subunit 6 [UDP-forming],
putative
Length = 3252
Score = 71.9 bits (36), Expect = 1e-11
Identities = 108/132 (81%)
Strand = Plus / Plus
Query: 387 tcctgcatcacttttgagagaagccatccaggttatcagctgtggttatgaagataaaac 446
||||||||| ||| | | |||||||||||| ||||| |||||||| |||||||| || ||
Sbjct: 2238 tcctgcatctcttctaaaagaagccatccatgttattagctgtggatatgaagacaagac 2297
Query: 447 ggaatggggaaaggaagttggctggatatatggctctgtgactgaggatatcctgacagg 506
|||||||| || || | || ||||| ||||| ||||||||||| ||||| |||| ||
Sbjct: 2298 tgaatggggcaaagagatcggatggatctatggttctgtgactgaagatattttgactgg 2357
Query: 507 attcaagatgca 518
|| ||||||||
Sbjct: 2358 ctttaagatgca 2369
>29482.m000171 Cellulose synthase A catalytic subunit 3 [UDP-forming],
putative
Length = 2934
Score = 65.9 bits (33), Expect = 6e-10
Identities = 177/225 (78%)
Strand = Plus / Plus
Query: 405 agaagccatccaggttatcagctgtggttatgaagataaaacggaatggggaaaggaagt 464
|||||||||||| || ||||| ||||| ||||| || || || || |||||| || |
Sbjct: 1941 agaagccatccacgtcatcagttgtggctatgaggacaagaccgactggggacttgagct 2000
Query: 465 tggctggatatatggctctgtgactgaggatatcctgacaggattcaagatgcactgcca 524
|||||||| ||||| || | || ||||||||||| || || ||||||||||| ||||
Sbjct: 2001 gggctggatttatggatcaattacagaggatatccttacgggtttcaagatgcattgccg 2060
Query: 525 tggatggcgatctgtgtactgcatacctaagcggcctgcgtttaaggggtcagctcctat 584
||||||| | || | |||||||| || ||| ||||| |||||||| |||||||| ||
Sbjct: 2061 tggatggaggtccatctactgcatgccaaagttacctgcatttaagggttcagctcccat 2120
Query: 585 taatctgtcagatcgtctacaccaagttcttcgatgggcccttgg 629
|| |||||||||| || | ||||| ||||||||||| |||||
Sbjct: 2121 caacttgtcagatcggctcaatcaagtgcttcgatgggctcttgg 2165
>29761.m000416 Cellulose synthase A catalytic subunit 6 [UDP-forming],
putative
Length = 2700
Score = 63.9 bits (32), Expect = 2e-09
Identities = 98/120 (81%)
Strand = Plus / Plus
Query: 400 ttgagagaagccatccaggttatcagctgtggttatgaagataaaacggaatggggaaag 459
|||| ||||||||| || || || |||||||| ||||| ||||| || || ||||| |
Sbjct: 2215 ttgaaagaagccattcacgtcattagctgtggatatgaggataagaccgactggggtagt 2274
Query: 460 gaagttggctggatatatggctctgtgactgaggatatcctgacaggattcaagatgcac 519
||| | || ||||||||||| ||||| || || ||||| || ||||||||||||||||||
Sbjct: 2275 gaaataggatggatatatggttctgtaacagaagatattcttacaggattcaagatgcac 2334
>29904.m002970 Cellulose synthase A catalytic subunit 1 [UDP-forming],
putative
Length = 3180
Score = 56.0 bits (28), Expect = 6e-07
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 913 tggtggagaaatgagcagttttgggtgattggaggc 948
||||||||||||||||||||||||| |||||||||
Sbjct: 2698 tggtggagaaatgagcagttttgggcaattggaggc 2733