Jatropha Genome Database
- JcCA0145861.20
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0145861.20 + phase: 0 /partial
(675 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
29726.m003990 conserved hypothetical protein 198 3e-50
29726.m003991 conserved hypothetical protein 186 1e-46
>29726.m003990 conserved hypothetical protein
Length = 750
Score = 198 bits (100), Expect = 3e-50
Identities = 506/641 (78%), Gaps = 9/641 (1%)
Strand = Plus / Plus
Query: 1 gtattggatgtgtgcgcattgggttgttgctctcggttttggagtgagctttgtaggtct 60
||||| ||||| || ||||||||| |||||||||| || ||||| ||||| |||||||||
Sbjct: 79 gtattagatgtctgtgcattgggtagttgctctcgtttatggagggagctctgtaggtct 138
Query: 61 gattgcttgtgggaatttcttaccaaagagagatggccttcagtttc------ttttatc 114
|||||||| ||||| | |||||||||| | ||||||||||||||||| |||| |
Sbjct: 139 gattgcttatgggagtctcttaccaaacaaagatggccttcagtttcacttccttttctt 198
Query: 115 agtgacttttctccttgttcg---gttcctgtcataaagggatggagggagatttatata 171
| | | ||| ||| | | | |||| || ||||||||||||||||||||||| ||
Sbjct: 199 tgcaattcttcctcttctactactgatcctctcgtaaagggatggagggagatttatgta 258
Query: 172 aaaatgcatagagagatggcaggtaaagctactaccgtgattgagtttgtagagcatcgt 231
| ||||| ||||||||| |||||||| ||| | | |||||||||| |||||| |
Sbjct: 259 aggttgcatgaagagatggctggtaaagccactgctctagttgagtttgtggagcattct 318
Query: 232 tctttgtctcagtctcttgagattggagactataacaaagcaattcaagatttatggttg 291
||| | | | || ||||| ||||||| ||| | |||||| |||||||||| | |
Sbjct: 319 tctccatatgactcccttgaagttggagagtattataaagcacttcaagatttgtactcc 378
Query: 292 atgcgacttgcatttaaagatatccaaatgttccttttcaaaccgaacctaaatgtgttg 351
|||| |||||||||| |||| | |||||||| ||||||||||| | ||||||||| ||
Sbjct: 379 atgcagcttgcatttacagatgttcaaatgtttcttttcaaacccagactaaatgtgctg 438
Query: 352 ctgaacttggtgggcttgcactactgcattttctgtctgaaactaccggctagaaatgtc 411
|| || ||||| ||||||||||| |||||||| | || ||| | || ||| ||||
Sbjct: 439 cttaatttggttggcttgcactattgcatttttggacttaaagtgccagctgagcatgtt 498
Query: 412 atggacgcactccttagttgcaaaatttcagagcgggaagtgtgtgtaaattggtggaag 471
||||| || || || ||||||||| ||||||||||| ||||||||||||| |||||||||
Sbjct: 499 atggatgcgcttctgagttgcaaagtttcagagcggcaagtgtgtgtaaaatggtggaag 558
Query: 472 cttggcagatggttttatggcttccgcatgagagatgagtctcactctcgcaaggtatct 531
||||||||||||||| ||| |||| ||||| || ||| |||| ||||||| |||||||
Sbjct: 559 attggcagatggttttttgggttccacatgacggaagagcctcattctcgcacggtatct 618
Query: 532 ttgacggatcttacaacagacaaaggggaagatgtcttaggggtccttcaacgaggtgcc 591
|| | |||||||||||||| ||||| || || | | || ||||| |||||||||
Sbjct: 619 ctggcagatcttacaacagaaaaaggagaggagattctcaaagttcttcaccgaggtgcc 678
Query: 592 attcatgaagtcttacgtgttgagatcttcatctcaaatgc 632
|||||||| ||||||||| ||||||||| ||| || |||||
Sbjct: 679 attcatgaggtcttacgtattgagatctccatttctaatgc 719
>29726.m003991 conserved hypothetical protein
Length = 780
Score = 186 bits (94), Expect = 1e-46
Identities = 358/446 (80%)
Strand = Plus / Plus
Query: 154 tggagggagatttatataaaaatgcatagagagatggcaggtaaagctactaccgtgatt 213
||||||||||||||||||| | ||||| |||||||| || |||||||| | ||||||
Sbjct: 211 tggagggagatttatataaggacgcataaagagatggagggaaaagctacctctgtgatt 270
Query: 214 gagtttgtagagcatcgttctttgtctcagtctcttgagattggagactataacaaagca 273
| ||||| |||||| ||||| | ||| | || ||||| |||| || ||| | ||||||
Sbjct: 271 gtttttgtggagcattgttctctatctgaatcacttgaagttggggagtattataaagca 330
Query: 274 attcaagatttatggttgatgcgacttgcatttaaagatatccaaatgttccttttcaaa 333
||| |||||||| | |||| || | || | |||||| || ||||| ||||||||
Sbjct: 331 attgaagatttagattctatgcagatttcgttcagagatattcagatgtttcttttcaag 390
Query: 334 ccgaacctaaatgtgttgctgaacttggtgggcttgcactactgcattttctgtctgaaa 393
|| || || | |||| | || |||||||| ||||| ||||||||||||||||| || |||
Sbjct: 391 cccaagcttagtgtgctactaaacttggttggcttacactactgcattttctgccttaaa 450
Query: 394 ctaccggctagaaatgtcatggacgcactccttagttgcaaaatttcagagcgggaagtg 453
| |||||| || ||||||| ||| |||| ||||||||||||||||||| |||
Sbjct: 451 gtgccggctgagcatctcatggatgcaatcctgttttgcaaaatttcagagcggctagtc 510
Query: 454 tgtgtaaattggtggaagcttggcagatggttttatggcttccgcatgagagatgagtct 513
|||||||| ||||||||||||||||||||||| ||||| ||||||||||| ||||||||
Sbjct: 511 tgtgtaaaatggtggaagcttggcagatggttgtatgggttccgcatgagggatgagtcc 570
Query: 514 cactctcgcaaggtatctttgacggatcttacaacagacaaaggggaagatgtcttaggg 573
|| ||||| ||||||||||| | |||||| |||||||||||||| || || | |||
Sbjct: 571 cattctcgtaaggtatctttagcagatcttgtgacagacaaaggggaggaggttctcggg 630
Query: 574 gtccttcaacgaggtgccattcatga 599
||||||| |||||||||||||||||
Sbjct: 631 gtccttcgccgaggtgccattcatga 656
Score = 54.0 bits (27), Expect = 1e-06
Identities = 90/111 (81%)
Strand = Plus / Plus
Query: 1 gtattggatgtgtgcgcattgggttgttgctctcggttttggagtgagctttgtaggtct 60
||||| |||||||| |||| || ||||||||||||||||||| || | ||| ||||
Sbjct: 76 gtattagatgtgtgttcattaggcagttgctctcggttttggagggaattatgtgggtca 135
Query: 61 gattgcttgtgggaatttcttaccaaagagagatggccttcagtttctttt 111
|||||| | ||||| | || |||| ||| |||||||||||| ||||||||
Sbjct: 136 gattgcatatgggagtcgctaaccagagaaagatggccttcactttctttt 186