Jatropha Genome Database

JcCA0145841.10
Show Alignment:  
BLASTN 2.2.23 [Feb-03-2010]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= JcCA0145841.10 - phase: 0 /partial
         (259 letters)

Database: castor_wgs_0.1_cds 
           31,221 sequences; 31,347,911 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

30072.m000984 conserved hypothetical protein                           96   1e-19

>30072.m000984 conserved hypothetical protein
          Length = 1848

 Score = 95.6 bits (48), Expect = 1e-19
 Identities = 78/88 (88%)
 Strand = Plus / Plus

                                                                       
Query: 5   tattcaaatccaagataaaatggatagctttgttattactgatactatccacaggatctc 64
           ||||||||||||||||||||||||||||||| ||| | || |||||||| || |||||||
Sbjct: 14  tattcaaatccaagataaaatggatagctttattagtgctaatactatcaactggatctc 73

                                       
Query: 65  ttgttattcacctctctataaccaagtt 92
           | || |||||||| ||||| ||||||||
Sbjct: 74  tggtcattcacctttctattaccaagtt 101



 Score = 79.8 bits (40), Expect = 7e-15
 Identities = 61/68 (89%)
 Strand = Plus / Plus

                                                                       
Query: 192 gttatggggggttgtgaagcctttacagtcattacagccttatgccaatccaagaagcaa 251
           ||||||||| ||||| ||||| |||||||| |||||||||||||| || |||||||||| 
Sbjct: 192 gttatggggtgttgttaagccgttacagtccttacagccttatgcaaacccaagaagcag 251

                   
Query: 252 ctatccag 259
           ||||||||
Sbjct: 252 ctatccag 259