Jatropha Genome Database
- JcCA0144801.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0144801.10 + phase: 0
(750 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30138.m004049 ribulose-5-phosphate-3-epimerase, putative 726 0.0
>30138.m004049 ribulose-5-phosphate-3-epimerase, putative
Length = 795
Score = 726 bits (366), Expect = 0.0
Identities = 498/542 (91%)
Strand = Plus / Plus
Query: 205 accattggacctcttgtggttgatgctttgcgcccagtgacagatcttcctttggatgtg 264
|||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 250 accattggacctctagtggttgacgctttgcgcccagtgacagatcttcctttggatgtg 309
Query: 265 catttgatgattgtggaacctgaacaacgagtgccagattttatcaaagcaggagctgac 324
||| ||||||||||||| |||||||||||||| ||||||||||| || || |||||||||
Sbjct: 310 catctgatgattgtggagcctgaacaacgagtaccagattttattaaggctggagctgac 369
Query: 325 atagtcagtgttcactgtgagcaatcttccaccatccacttgcatcgcacagtaaatcag 384
|| ||||||||||| |||||||||||||| |||||||| |||||||||||||||||||||
Sbjct: 370 attgtcagtgttcattgtgagcaatcttctaccatccatttgcatcgcacagtaaatcag 429
Query: 385 ataaaagatcttggagctaaagctggagtcgtcttgaaccctgctactccattgagtgct 444
|||||| ||||||||| ||||| ||||| ||||||||||||||||| ||| ||||||||
Sbjct: 430 ataaaaagtcttggagcaaaagccggagttgtcttgaaccctgctaccccactgagtgct 489
Query: 445 atagaatatgttcttgatgtggttgatcttgtcttgattatgtctgtcaaccctggtttt 504
||||| ||||| ||||||||||||||||| |||||||||||||| || |||||||||||
Sbjct: 490 atagattatgtccttgatgtggttgatctagtcttgattatgtcggtgaaccctggtttc 549
Query: 505 ggtggtcaaggctttattgagagtcaagtgaagaaaatctcagatttgagaagactgtgt 564
||||| ||| ||||||||||||||||||| ||||||||||| |||||||||||| ||||
Sbjct: 550 ggtgggcaaagctttattgagagtcaagtaaagaaaatctctgatttgagaagattgtgc 609
Query: 565 gcagagaagggggtaaatccatggattgaggtagatggtggagttggtcccaagaatgca 624
||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 610 gcagagaagggagtaaatccatggattgaggtggatggtggagttggtcccaagaatgca 669
Query: 625 tataaggttattgaggctggggctaatgctttggttgctggttcagcagtttttggagct 684
|| ||||||||||||||||||||||||||| | || ||||||||||| || ||||| ||
Sbjct: 670 tacaaggttattgaggctggggctaatgctctagtggctggttcagctgtatttggggcc 729
Query: 685 aaagattatgctgaagctataaaaggaatcaaaaccagcaaaaggccagtagcagtgcca 744
||||||||||| |||||||||||||||||||||| ||||||||||||||||||||| |||
Sbjct: 730 aaagattatgcagaagctataaaaggaatcaaaaacagcaaaaggccagtagcagtacca 789
Query: 745 gc 746
||
Sbjct: 790 gc 791
Score = 170 bits (86), Expect = 8e-42
Identities = 116/126 (92%)
Strand = Plus / Plus
Query: 15 gagaaaaattcatactgtagtgaaggcaacagcccgagttgataagttctctaaaagtga 74
||||||||||||||||||||||||||||| || || |||||||||||||||||||||||
Sbjct: 114 gagaaaaattcatactgtagtgaaggcaagtgctcgggttgataagttctctaaaagtga 173
Query: 75 tattattgtttccccatccattctctctgctaattttgcaaagctaggagagcaggtaaa 134
||| || ||||||||||| ||||| || |||||||| |||||||||||||||||||||||
Sbjct: 174 tatcatcgtttccccatctattctgtcggctaatttcgcaaagctaggagagcaggtaaa 233
Query: 135 agcagt 140
||||||
Sbjct: 234 agcagt 239