Jatropha Genome Database
- JcCA0144561.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0144561.10 - phase: 0
(2085 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
30226.m002028 Cleavage and polyadenylation specificity factor 73... 1179 0.0
>30226.m002028 Cleavage and polyadenylation specificity factor 73 kDa
subunit, putative
Length = 1086
Score = 1179 bits (595), Expect = 0.0
Identities = 910/1015 (89%)
Strand = Plus / Plus
Query: 29 tgaagagacgagatgcgccggtaacaagagaaggggatcaactaactgtaactcctctcg 88
|||| ||||| ||||| || |||||||||||||||||| ||||||||| |||||||| |
Sbjct: 29 tgaaaagacgggatgctccagtaacaagagaaggggatgtactaactgttactcctcttg 88
Query: 89 gcgccggaaatgaagtgggtcggtcttgtgtatacatgtcctataagggcaaaacaatcc 148
| || || ||||||||||| || || ||||| |||||||| ||||| || |||| |
Sbjct: 89 gggctggtaatgaagtgggccgttcctgtgtgtacatgtcttataaaggaaaaattgttt 148
Query: 149 tgtttgattgtggaattcatccagcttattcgggcatggctgccttgccatacttcgatg 208
|||| ||||||||||||||||| ||||| || |||||||| || ||||||||||||||||
Sbjct: 149 tgttcgattgtggaattcatccggcttactcaggcatggccgcgttgccatacttcgatg 208
Query: 209 agattgatccttccactattgatgtactccttatcacccactttcacttggatcatgctg 268
||||||||||||||||||||||||| || || || || ||||||||||||||||||||||
Sbjct: 209 agattgatccttccactattgatgtgcttctcattacacactttcacttggatcatgctg 268
Query: 269 catctctaccttatttcttggagaagaccacgtttaagggtcgtgtgttcatgactcatg 328
||||||||||||||||||||||||||||||| ||||| || ||||| |||||||||||||
Sbjct: 269 catctctaccttatttcttggagaagaccacatttaaaggacgtgttttcatgactcatg 328
Query: 329 caaccaaggttatttataagttgctgttaactgattatgtgaaagtgagcaaggtttcaa 388
| || |||| ||||||||||||||| |||||||||||||||||||||||||||||||| |
Sbjct: 329 ctacaaaggctatttataagttgcttttaactgattatgtgaaagtgagcaaggtttcca 388
Query: 389 ttgaagacatgttgtttgatgaacaagatataaatcgttccatggacaaaattgaggtta 448
||||||| |||||||||||||||||||| |||||||| |||||||| |||||||||||||
Sbjct: 389 ttgaagatatgttgtttgatgaacaagacataaatcgctccatggataaaattgaggtta 448
Query: 449 ttgatttccatcaaacagtggaggtcaatggcattaaattttggtgttatactgctggcc 508
||||||| |||||||| |||||||| |||||||||||||||||||| || |||||||| |
Sbjct: 449 ttgattttcatcaaacggtggaggtgaatggcattaaattttggtgctacactgctggac 508
Query: 509 atgtccttggtgctgccatgttcatggttgatattgctggtgttcgagtactgtatactg 568
|||| ||||||||||||||||| |||||||| ||||||||||||||| | || |||||||
Sbjct: 509 atgtgcttggtgctgccatgtttatggttgacattgctggtgttcgacttctctatactg 568
Query: 569 gagattattcacgtgaagaagatcgacatcttcgtgctgctgagatgccacagttttctc 628
|||| ||||| |||||||||||||| |||||||| ||||||||||||||||| || || |
Sbjct: 569 gagactattcgcgtgaagaagatcggcatcttcgagctgctgagatgccacaattctccc 628
Query: 629 ctgatatatgtataattgaatctacttatggggtccaactccatcaacctcgacatattc 688
||||||| |||||||||||||| |||||||| || || |||||||||||||| ||||||
Sbjct: 629 ctgatatttgtataattgaatcaacttatggtgttcagctccatcaacctcggcatatta 688
Query: 689 gagagaagcggttcactgatgtcatccactcaaccatttctcaagggggtcgtgttctaa 748
|||| ||||| ||||||||||||||||||||||| ||||||||||| || |||||| |||
Sbjct: 689 gagaaaagcgattcactgatgtcatccactcaactatttctcaaggtggacgtgttttaa 748
Query: 749 tcccagcatttgcccttgggcgtgcccaagaacttctcttgatccttgacgagttctggg 808
||||||||||||||||||| |||||||||||||||||||| |||||||| |||| |||
Sbjct: 749 tcccagcatttgcccttggccgtgcccaagaacttctcttaatccttgatgagtattggt 808
Query: 809 caaaccatcctgagctccataacgttcctatatattatgcttctccccttgcaaaaaagt 868
|||||||||| ||| | ||||| ||||| |||||||||||||||||||| |||||||| |
Sbjct: 809 caaaccatcccgagttacataatgttccaatatattatgcttctcccctagcaaaaaaat 868
Query: 869 gtatgactgtctatcagacatatatcctttcaatgaatgagaggattcgcaaccagtttg 928
|||||||||| ||||||||||||||||| ||||||||||||||||| |||||||||||||
Sbjct: 869 gtatgactgtttatcagacatatatcctatcaatgaatgagaggatccgcaaccagtttg 928
Query: 929 caaactcgaatccattcaaattcaaacacatatcgcccttaaacagcatagaggatttca 988
||||||| ||||| |||||||||||||||||||| || ||||| ||||| |||||||| |
Sbjct: 929 caaactcaaatcccttcaaattcaaacacatatcaccattaaatagcatcgaggatttta 988
Query: 989 ctgatgtggggccatcagttgtcatggcaagtcctggtggactgcaaagtgggct 1043
||||||||||||||||||| |||||||||||||||||||||||||| || |||||
Sbjct: 989 ctgatgtggggccatcagtggtcatggcaagtcctggtggactgcagagcgggct 1043