Jatropha Genome Database
- JcCA0144521.10
BLASTN 2.2.23 [Feb-03-2010]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= JcCA0144521.10 + phase: 2 /pseudo/partial
(1396 letters)
Database: castor_wgs_0.1_cds
31,221 sequences; 31,347,911 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
27623.m000136 Multidrug resistance protein, putative 1277 0.0
30138.m003951 Antigen peptide transporter, putative 135 8e-31
>27623.m000136 Multidrug resistance protein, putative
Length = 1935
Score = 1277 bits (644), Expect = 0.0
Identities = 962/1068 (90%)
Strand = Plus / Plus
Query: 319 agaaaaagttgatgagacactgaagctaggactcagacaagcgagagtagttggtctttt 378
||||||||||||||||||||||||||| |||||||||||||| ||||| |||||||| ||
Sbjct: 855 agaaaaagttgatgagacactgaagctgggactcagacaagcaagagtggttggtctatt 914
Query: 379 ctttggaggactaaatgcagcatccacattatctgttatcatagtggtagtttatggtgc 438
||||||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||
Sbjct: 915 ctttggaggactaaatgcagcatccactttatctgtcatcattgtggtagtttatggtgc 974
Query: 439 atacctgacaataataggtttcatgaccgcgggctctctcacttccttcattctttatag 498
|||||| || |||||||| | |||||| || |||||||| ||||||||||||||||||||
Sbjct: 975 ataccttacgataataggctccatgactgcaggctctcttacttccttcattctttatag 1034
Query: 499 tctcacagttggttcttcagtatcttctttgtcaggattgtatactactgcaatgaaagc 558
|||||||||||||||||||||||||||| |||||||||| ||||| ||||||||||||||
Sbjct: 1035 tctcacagttggttcttcagtatcttctctgtcaggattatatacaactgcaatgaaagc 1094
Query: 559 tgcaggggccagtaggagagtttttcagctcctagatcgtgtctcaagcatgccaaaatc 618
||| ||||| |||||||||||||||||||| | ||||| |||||||||||||||||||
Sbjct: 1095 tgctggggcaagtaggagagtttttcagcttttggatcgcatctcaagcatgccaaaatc 1154
Query: 619 gggagataagtgccctgttcgtgatccagatggggatgtggaattggatgacgtgtggtt 678
||||| |||||||| | |||||||||||| ||||| || |||||||| || |||||
Sbjct: 1155 tggagacaagtgcccaataattgatccagatggtgatgtagagttggatgatgtctggtt 1214
Query: 679 tgcttatccttctcgtcctagtcacatggtactcaagggcataacattgaaactgaaccc 738
|||||||||||| || || ||||||||||| |||||||| |||||||||||||| |||||
Sbjct: 1215 tgcttatccttcccgcccaagtcacatggtgctcaagggtataacattgaaactaaaccc 1274
Query: 739 aggctcaaaagttgctctcgttggtccaagtggcggcggcaagacaacaatagcaaactt 798
||||||||| |||||||| |||||||||||||| || |||||||||||||||||||| ||
Sbjct: 1275 aggctcaaaggttgctcttgttggtccaagtggtggtggcaagacaacaatagcaaattt 1334
Query: 799 aattgaacggttctatgatcctctgaagggaaagatcctgctaaatggtgttccattagt 858
||||||| ||||||| |||||||| ||||||||||| |||||||||| ||||| ||||
Sbjct: 1335 aattgaaaggttctacgatcctctcaagggaaagattttgctaaatggggttcccctagt 1394
Query: 859 ggaaatatcacacgggtatcttcacagtaaggtcagtatagtgagccaagagccagttct 918
|||||||||||| | ||||||||| || |||||||||||||| ||||| |||||||||||
Sbjct: 1395 ggaaatatcacatgagtatcttcatagcaaggtcagtatagttagccaggagccagttct 1454
Query: 919 gttcaattgttccatagaagagaacattgcctacgggttcaatggcaaagccaattcttc 978
||||||||||| || |||||||||||||||||||| |||||||| ||||| | ||||||
Sbjct: 1455 cttcaattgttctattgaagagaacattgcctacggattcaatggtaaagctagttcttc 1514
Query: 979 tgaaatagaaactgtagctaaaatgtccaatgcccatgaattcatagaaaaatttccaga 1038
|| ||||| ||||||| |||||| | || ||||| ||||||||||| || ||||| ||
Sbjct: 1515 agacgtagaagctgtagcaaaaatggctaacgcccacgaattcatagacaagtttcctga 1574
Query: 1039 aaaatatcaaacagtggttggtgaacgtgggctgaggttgtccggaggccaaaaacaaag 1098
||| |||||||||||||||||||||||||| | ||| |||| |||||||||||||||||
Sbjct: 1575 aaagtatcaaacagtggttggtgaacgtggcttaaggctgtcaggaggccaaaaacaaag 1634
Query: 1099 agtggcaattgcaagagcactattgatgaatccaagaattttgctattggatgaagccac 1158
||||||||||||||||||||||||||||||||||| | |||||||||| |||||||||||
Sbjct: 1635 agtggcaattgcaagagcactattgatgaatccaaaacttttgctattagatgaagccac 1694
Query: 1159 aagtgctttggatgcagagagtgaataccttgttcaggacgccatggattctctgatgag 1218
||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 1695 aagtgctctggatgcagagagtgaataccttgttcaggatgccatggattctctgatgaa 1754
Query: 1219 gggcaggactgttcttgttatagcacacaggctttcaactgtcaaaagtgcagatattgt 1278
||| ||||||||||||||||||||||||||||| |||||||||||||||||||| || ||
Sbjct: 1755 gggtaggactgttcttgttatagcacacaggctgtcaactgtcaaaagtgcagacatagt 1814
Query: 1279 tgctgttatatctgatggacagatagctgaaagcggcacccacgaagaacttctcagcaa 1338
|||||| ||||| ||||| |||||| |||||||||||||||| ||||| |||||||| ||
Sbjct: 1815 tgctgtcatatcagatgggcagataactgaaagcggcacccatgaagagcttctcaggaa 1874
Query: 1339 ggatggtatttacactgcactagtcaggagacaactacaagaacccaa 1386
|||||| ||||||||||||||||| |||||||| ||||||||||||||
Sbjct: 1875 ggatggcatttacactgcactagttaggagacagctacaagaacccaa 1922
Score = 428 bits (216), Expect = e-119
Identities = 270/288 (93%)
Strand = Plus / Plus
Query: 29 ggaaatagctttctttgatgttactcgaacaggggaacttctaagcaggctgtcagaaga 88
||||||||| |||||||||||||||||||||||||||||||| ||| |||||||||||||
Sbjct: 495 ggaaatagccttctttgatgttactcgaacaggggaacttctcagccggctgtcagaaga 554
Query: 89 cacccaggtcataaaaaatgctgcaacaaccaatctttctgaggctctccgtaatgtaac 148
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 555 cacccaggtcataaaaaatgctgcaacaaccaatctttctgaggctctccgtaatgtaac 614
Query: 149 aactgcattaattggtgtcgctttcatgttttcatcatcgtggaacttaacattgttggc 208
||||||||||||||||| || ||||||||| | ||||| ||||| ||||||||| ||||
Sbjct: 615 cactgcattaattggtgttgccttcatgtttacgtcatcatggaaattaacattgctggc 674
Query: 209 tttggctgttgtaccagtcatttcagttgcagtgagaaaatttgggcgctatcttcgtga 268
|||||||||||||||| |||||||| |||| || |||||||||||||||||| |||||||
Sbjct: 675 tttggctgttgtaccactcatttcaattgctgtaagaaaatttgggcgctatgttcgtga 734
Query: 269 tctctcacatgaaactcaagctgcagctgcagtagctgcttcaatagc 316
||| ||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 735 tctttcacatgcaactcaagctgcagctgcagtagctgcttcaatagc 782
>30138.m003951 Antigen peptide transporter, putative
Length = 1839
Score = 135 bits (68), Expect = 8e-31
Identities = 218/268 (81%)
Strand = Plus / Plus
Query: 1122 tgatgaatccaagaattttgctattggatgaagccacaagtgctttggatgcagagagtg 1181
||||||| ||||||||| | || | |||||||| |||||||| |||||||| || ||||
Sbjct: 1562 tgatgaacccaagaattctcctccttgatgaagctacaagtgccttggatgctgaaagtg 1621
Query: 1182 aataccttgttcaggacgccatggattctctgatgaggggcaggactgttcttgttatag 1241
|||| | || ||||| |||||||||||||| |||| | ||||| ||||| ||||| |
Sbjct: 1622 aatatccagtgcaggatgccatggattctctaatgaaagaaaggacagttctggttattg 1681
Query: 1242 cacacaggctttcaactgtcaaaagtgcagatattgttgctgttatatctgatggacaga 1301
| || || || || |||||| |||||||| ||| ||| || ||| | |||||||| ||||
Sbjct: 1682 cccatagactatccactgtccaaagtgcaaatactgtagcagttgtctctgatggccaga 1741
Query: 1302 tagctgaaagcggcacccacgaagaacttctcagcaaggatggtatttacactgcactag 1361
|| ||||||||||||| || ||||| ||||| ||||||||| |||| || ||||| |||
Sbjct: 1742 taactgaaagcggcactcatgaagagcttcttagcaaggatcgtatctatgctgcattag 1801
Query: 1362 tcaggagacaactacaagaacccaaaac 1389
| ||||||||| | |||| |||||||||
Sbjct: 1802 tgaggagacaattgcaaggacccaaaac 1829
Score = 61.9 bits (31), Expect = 1e-08
Identities = 52/59 (88%)
Strand = Plus / Plus
Query: 530 tcaggattgtatactactgcaatgaaagctgcaggggccagtaggagagtttttcagct 588
|||||||||||| |||| ||||||| ||||||||| ||||| ||| | |||||||||||
Sbjct: 991 tcaggattgtatgctacagcaatgagagctgcaggagccagcaggcgggtttttcagct 1049